| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3643 |
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| Symbol | |
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| ID | 4013672 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3844595 |
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| End bp | 3845230 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637943301 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_550445 |
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| Protein GI | 91789493 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02939] RNA polymerase sigma factor RpoE |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.145973 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCGG ACGGGACACC CCTGCCATCC GAAAAAGCGG CTGATAGCGA CGCCATGCTG
GTCGAGCGCG CCGTGGCCGG GGACCAAAAG GCCTTTGAGC TGCTGGTGAT CAAGTACCAG
CGCCGCATTC AGCGCCTGAT AGGGCGCATG GTGCGCGATG TGGATCTGGT GGAAGACATC
GCCCAGGAAA CGTTTATCCG GGCCTACCGC GCCCTGGCCC AGTTCCGGGG CGAGGCCCAG
TTCTACACCT GGCTCTACCG GATTGCGGTC AATACCGCCA AAAAAGCCCT GATGGATCTC
AAGCGGGATC CCACCGTTTC CGAAAATTCC TTTAAATCCG GAGAGGACGA TGAAACTTCC
CCGCTGGAAA ACGAACTAAC TAGCTCGGAA ACGCCGGATG CCGTATTGGC CAGCAAGGAA
ATTGCGGAAA TGGTCAACGC AGCTATGGAA GCATTGCCGG AAGAGCTTCG TCAGGCCATC
ACTTTGCGCG AAATCGAAGG GTTGAGCTAT GAAGAAATCT CTGAGGCCAT GAATTGTCCC
ATTGGCACAG TGCGGTCCCG TATTTTCAGG GCGCGTGAAG CGATCTCTGG GAAAGTCAAG
CCCTTGCTGG AAAACCAGTC AGGCAAGCGC TGGTGA
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| Protein sequence | MTADGTPLPS EKAADSDAML VERAVAGDQK AFELLVIKYQ RRIQRLIGRM VRDVDLVEDI
AQETFIRAYR ALAQFRGEAQ FYTWLYRIAV NTAKKALMDL KRDPTVSENS FKSGEDDETS
PLENELTSSE TPDAVLASKE IAEMVNAAME ALPEELRQAI TLREIEGLSY EEISEAMNCP
IGTVRSRIFR AREAISGKVK PLLENQSGKR W
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