| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3640 |
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| Symbol | |
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| ID | 4013708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3841148 |
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| End bp | 3842611 |
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| Gene Length | 1464 bp |
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| Protein Length | 487 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637943298 |
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| Product | peptidase S1C, Do |
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| Protein accession | YP_550442 |
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| Protein GI | 91789490 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
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| TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.316615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTGAAT TGAACCGGAA ACCCCTGCGC TCCTATTTGC TCGCAGGTCT GTTGGGCGTG
GTGACAGCCA CCGTGGTGCT GCCTGTCGCT CCCGCGTGGG CGCAGGTCCG CACGCTGCCT
GACTTCACCG ATCTGGTTGA TCAGGTCGGC CCCTCGGTGG TGAACATCCG CACGATAGAA
AAAGTGAAAG CCTCGGGTGC GGGAAGCGTG GATGAGCAAA TGCTGGAGTT TTTCAGGCGT
TTCGGGATTC CCGTACCACC CAACATGCCG CGCGCGCCGC GTCCAGACCG CGGCCAGCCC
CAGCCCGACG AAGAGCAGCC GCGTGGTGTG GGTTCCGGCT TCATCCTCAC GGGAGACGGT
TTTGTCATGA CCAATGCCCA TGTGGTGGAG GGCGCCGATG AAGTGATTGT CACGCTGACT
GACAAGCGTG AATTCAAGGC CAAAATCATC GGAGCGGACA AGCGCAGCGA TGTGGCGGTC
GTGAAGATAG AGGCAAGCGG GTTGCCGGCC GTGAAAATCG GTGACATCAA CCGCCTGAAA
GTGGGCGAAT GGGTGATGGC CATCGGCTCA CCGTTTGGCC TTGAAAACAC CGTGACGGCG
GGTATTGTGA GCGCCAAGCA GCGCGATACC GGCGACTACC TGTCCTTCAT CCAGACCGAT
GTGGCCATCA ACCCCGGCAA CTCGGGTGGG CCCCTGATCA ACATGCGCGG GGAGGTCGTG
GGTATCAACA GCCAGATCTA TTCACGTTCT GGCGGCTTTC AGGGCATTTC GTTTTCCATC
CCGATTGACG AGGCAACGCG TGTTTCAGAC CAGCTGCGCA GCAGTGGTCG GGTCACACGT
GGACGCATCG GGGTGCAGAT CGACCAGGTC AGCAAGGAAG TGGCCGAATC CATCGGTCTG
GGCAGTCCCC GCGGGGCGCT GGTCAGAGGC GTGGAGGCTG GTGCACCTGC AGAAAAGGCA
GGCGTAGAAG CCGGCGACAT CATCATCAAG TTCGACGGCA AGCAGATCGA AAAATCCAGT
GATCTTCCGC GCATGGTCGG CAATGTGAAG CCCGGCACCA AGGCGGTGGT GACCGTCTTC
AGGCGGGGTG CTACCAGGGA TTTGCCGGTG GTCATCGCGG AGGTGGAAGC AGAGAAGCCC
CTTCGCAAGG CCTCGTCACC GGAAGCCAAA CCGCCGGTCG CCGGCCCTGC ACAGGCTTTG
GGCCTGGTGG TGAGCGACCT GCCGGATGCA CAGAAAAAGG AACTCAAGAT CAAGGGCGGG
GTCCGGGTAG ACAGCGCCGA GGGTGGAGCC GCCCGTGCAG GACTTCGCGA GGGTGATGTG
ATCGTTGCGA TTGCCAACTC CGAAATCACA ACCGTCAAGG AGTTCGAGGC TGCGCTCGCA
AAAATTGACA AGAGCAAGCC CGTCAATGTG CTGTTTCGCC GGGGAGAACT GGCGCAGTTT
GTGTTGATCC GGCCGGCACG TTGA
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| Protein sequence | MLELNRKPLR SYLLAGLLGV VTATVVLPVA PAWAQVRTLP DFTDLVDQVG PSVVNIRTIE
KVKASGAGSV DEQMLEFFRR FGIPVPPNMP RAPRPDRGQP QPDEEQPRGV GSGFILTGDG
FVMTNAHVVE GADEVIVTLT DKREFKAKII GADKRSDVAV VKIEASGLPA VKIGDINRLK
VGEWVMAIGS PFGLENTVTA GIVSAKQRDT GDYLSFIQTD VAINPGNSGG PLINMRGEVV
GINSQIYSRS GGFQGISFSI PIDEATRVSD QLRSSGRVTR GRIGVQIDQV SKEVAESIGL
GSPRGALVRG VEAGAPAEKA GVEAGDIIIK FDGKQIEKSS DLPRMVGNVK PGTKAVVTVF
RRGATRDLPV VIAEVEAEKP LRKASSPEAK PPVAGPAQAL GLVVSDLPDA QKKELKIKGG
VRVDSAEGGA ARAGLREGDV IVAIANSEIT TVKEFEAALA KIDKSKPVNV LFRRGELAQF
VLIRPAR
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