Gene Bpro_3624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3624 
Symbol 
ID4013692 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3827563 
End bp3828507 
Gene Length945 bp 
Protein Length314 aa 
Translation table11 
GC content61% 
IMG OID637943283 
ProductABC transporter related 
Protein accessionYP_550427 
Protein GI91789475 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TTCAGAATAT CAGCAAATCG TATGGCCTTG TCACCGCGAT AGACGGGGTG 
AACCTCAAGA TTGACCGCGG GGAGTTTGTG GTCCTGATCG GTGCTTCGGG CTCGGGCAAA
TCCACCATGC TGAAGATGAT TAACCGCATG GAAAGCCACG ATGCGGGAAG AATCCTTTTC
GATGGCGAAG AAATCTACAG CTTCAAGGTG CGCGACCTGC GCCTGCGCAT GGGCTACGCC
ATTCAGTCTG TGGGTTTGTT TCCGCACTGG ACGGTGGAGC GCAACATTGC CACCGTGCCC
CAGATGCTCG GCTCGACGGC CCAAAAAATC CGGGATCGCG TCACCACGCT GCTGCAGCTT
TTCGAGCTTG ACCCAGAGAC CTATAGAACC CGTTACCCCC ACCAGCTGTC GGGCGGCCAG
CAGCAGCGCG TGGGCGTTGC CCGTGCCTTG GCGGCAGACC CGGATGTTTT ATTGATGGAC
GAGCCGTTTG GGGCCCTGGA CCCGGTGATT CGGGCGTCAT TGCAGCTGGA GATGAAGCGC
GTTCACCAGG CCTCCGGCAA AACCATCGTG ATGGTCACCC ACGACATTGA CGAGGCCTTG
CGCCTGGCCA CCAAAATCGT GCTGCTCGAC CAGGGCCGGA TTGTGCAGGT GGCGACGCCG
CTGGCGCTTT TGGCCAGGCC CGCCAACGCC TTGGTGGTCG ACTTTGTGGG CCGCAGTGAC
ATCGGCATCA AGCTGTTGTC GCTTCAGTCT GCCCAGAGCC TGGCGCGGCA CGAACCCCAA
CATCGGGGCC CCAGCCTGCC CGCTGCCACC ACGCTGCGTG AGGCAGTGTC TTATCTGGCC
ATGCGCCAGC TCGCGGTGGT GAATCTGACG GATGCCGCTG GCGCCCACGC CGGCGTGCTG
CATGCCGCTG ATATTTTTCA CAAGGCCGGG CCTTCCGATG TTTAG
 
Protein sequence
MIEFQNISKS YGLVTAIDGV NLKIDRGEFV VLIGASGSGK STMLKMINRM ESHDAGRILF 
DGEEIYSFKV RDLRLRMGYA IQSVGLFPHW TVERNIATVP QMLGSTAQKI RDRVTTLLQL
FELDPETYRT RYPHQLSGGQ QQRVGVARAL AADPDVLLMD EPFGALDPVI RASLQLEMKR
VHQASGKTIV MVTHDIDEAL RLATKIVLLD QGRIVQVATP LALLARPANA LVVDFVGRSD
IGIKLLSLQS AQSLARHEPQ HRGPSLPAAT TLREAVSYLA MRQLAVVNLT DAAGAHAGVL
HAADIFHKAG PSDV