Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3624 |
Symbol | |
ID | 4013692 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3827563 |
End bp | 3828507 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637943283 |
Product | ABC transporter related |
Protein accession | YP_550427 |
Protein GI | 91789475 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATCGAGT TTCAGAATAT CAGCAAATCG TATGGCCTTG TCACCGCGAT AGACGGGGTG AACCTCAAGA TTGACCGCGG GGAGTTTGTG GTCCTGATCG GTGCTTCGGG CTCGGGCAAA TCCACCATGC TGAAGATGAT TAACCGCATG GAAAGCCACG ATGCGGGAAG AATCCTTTTC GATGGCGAAG AAATCTACAG CTTCAAGGTG CGCGACCTGC GCCTGCGCAT GGGCTACGCC ATTCAGTCTG TGGGTTTGTT TCCGCACTGG ACGGTGGAGC GCAACATTGC CACCGTGCCC CAGATGCTCG GCTCGACGGC CCAAAAAATC CGGGATCGCG TCACCACGCT GCTGCAGCTT TTCGAGCTTG ACCCAGAGAC CTATAGAACC CGTTACCCCC ACCAGCTGTC GGGCGGCCAG CAGCAGCGCG TGGGCGTTGC CCGTGCCTTG GCGGCAGACC CGGATGTTTT ATTGATGGAC GAGCCGTTTG GGGCCCTGGA CCCGGTGATT CGGGCGTCAT TGCAGCTGGA GATGAAGCGC GTTCACCAGG CCTCCGGCAA AACCATCGTG ATGGTCACCC ACGACATTGA CGAGGCCTTG CGCCTGGCCA CCAAAATCGT GCTGCTCGAC CAGGGCCGGA TTGTGCAGGT GGCGACGCCG CTGGCGCTTT TGGCCAGGCC CGCCAACGCC TTGGTGGTCG ACTTTGTGGG CCGCAGTGAC ATCGGCATCA AGCTGTTGTC GCTTCAGTCT GCCCAGAGCC TGGCGCGGCA CGAACCCCAA CATCGGGGCC CCAGCCTGCC CGCTGCCACC ACGCTGCGTG AGGCAGTGTC TTATCTGGCC ATGCGCCAGC TCGCGGTGGT GAATCTGACG GATGCCGCTG GCGCCCACGC CGGCGTGCTG CATGCCGCTG ATATTTTTCA CAAGGCCGGG CCTTCCGATG TTTAG
|
Protein sequence | MIEFQNISKS YGLVTAIDGV NLKIDRGEFV VLIGASGSGK STMLKMINRM ESHDAGRILF DGEEIYSFKV RDLRLRMGYA IQSVGLFPHW TVERNIATVP QMLGSTAQKI RDRVTTLLQL FELDPETYRT RYPHQLSGGQ QQRVGVARAL AADPDVLLMD EPFGALDPVI RASLQLEMKR VHQASGKTIV MVTHDIDEAL RLATKIVLLD QGRIVQVATP LALLARPANA LVVDFVGRSD IGIKLLSLQS AQSLARHEPQ HRGPSLPAAT TLREAVSYLA MRQLAVVNLT DAAGAHAGVL HAADIFHKAG PSDV
|
| |