| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3592 |
|---|
| Symbol | |
|---|
| ID | 4013738 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3790987 |
|---|
| End bp | 3793887 |
|---|
| Gene Length | 2901 bp |
|---|
| Protein Length | 966 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637943251 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_550395 |
|---|
| Protein GI | 91789443 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.999758 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.14319 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAAAT CGCCTACGCC CGTCCGACCT TCCCATGCTT TCGCTGCAAC GCGCAAAACC
TTCAAAACCG CATCAGGCAA AACGGGCCAG TTTTATTCCC TGCCCGCGCT GGCCAAACAG
TTCCCCAAGG TGGCGCGCCT GCCGGTGTCC CTGCGCATCG TGCTCGAGTC GGTGCTGCGC
AACTGCGATG GCAAAAAAGT GACGGCCGAG CATGTGGGGG AGGTGGCCAA CTGGGCGCCC
CGTGCCGACC GTACGCAGGA AATCCCCTTT GTGGTTTCGC GCGTGGTGCT GCAGGACTTC
ACCGGCGTGC CGCTGCTGGC CGACCTGGCC GCGATGCGCA GCGTCGCCCT GAAGCTGGGC
AAGAACCCGA AATCGATTGA GCCGCTGGTG CCGGTGGACC TGGTGGTGGA CCATTCCATC
ATGGTTGACT ACTACGGCAA GAAGAATTCG CTGGACCTGA ACATGAAGCT CGAATTCCAG
CGCAACCGCG AGCGCTACGA ATTCATGAAA TGGGGCATGC AGGCCTTTGA CACCTTTGGC
GTGGTGCCTC CCGGTTTCGG CATCGTGCAC CAGGTGAATC TCGAATACCT GGCGCGCGGC
GTGCACAAGA CAAAAGAGGG GGTGTATTAC CCCGATTCGC TGGTCGGCAC GGATAGCCAC
ACCACCATGA TCAACGGCAT TGGCGTGGTG GCCTGGGGTG TGGGCGGCAT CGAGGCTGAG
GCCGCCATGC TGGGCCAGCC GGTGTACTTC CTCACGCCGG ATGTGGTGGG CTTTGAGCTG
ACGGGCCGGC TGCGCGAAGG CGTCACCGCG ACCGACCTGG TGCTGCGCGT GACGGAAACC
CTGCGCAAGG AAAAGGTCGT CGGCAAGTTT GTCGAATTTT TCGGCGAAGG CACCCGCACG
CTGGCCCTGC CCGACCGTGC CACGATTGGC AATATGGCAC CCGAATACGG CGCCACCATG
GGCTTTTTCC CGGTTGATGA AAAAACCATC GAGTACTTCA AGGGCACCGG GCGTACCAAG
GACGAAATCG AGGCTTTCGA GGCTTACTTC AGGGCACAGG GCCTGTTCGG CGTGGCCAAG
GCCGGCGAAA TTGACTACTC GCAGGTGGTC AAGCTCGACC TGGGCGACGT CACACCCAGC
CTCGCCGGCC CCAAACGACC GCAGGACCGC ATCGAGCTGG GCAATGTGGC CAGCCAGTTC
GCCTCGCTTT TTAGCAAACC GATTGCGGAA AATGGCTTTA ACCAGCCTGC CGCCATGCTG
GCCACACGCC ATTTGTTGCG GCACACGGAC GATGGCCGCG CCGATACCCT GCCGGGGGCG
CTTCCCACGC CAATGGGCGC CCCGCGCTCG GTGGTCGAGA TGGAAAGCAA CCGCCCCACG
CTGGCCTCTG GCACTGCCGC ACACTCGGAA GTCCCCACAC CCGAGTCCAA AAAAGCCGGC
ATCAGCATCG GCAACGGCGA TGTGCTGATC GCGGCGATTA CCAGCTGCAC CAATACGTCG
AACCCCAGCG TATTGCTGGC GGCCGGCCTG CTGGCCAAAA AAGCGGTGGA GGCGGGCCTG
AAAGTGCAGC CGCACATCAA GACCTCGCTG GCGCCCGGTT CACGCATCGT GACCGAATAC
CTGACCGAGA CCGGCTTGTT GCCCTACCTT GAAAAGCTGG GCTTTGCGCT GGCCGGTTAC
GGCTGCACCA CCTGTATCGG CAATGCCGGC GATTTGACGC CCGAGATCAA CGAAGCCATC
ACCAAGAGCG ACCTGGTGTG CGCCGCCGTG CTGTCGGGCA ACCGCAACTT CGAAGCCCGC
ATCCATCCCA ACCTGAAAGC CAACTTCCTG GCCAGCCCCC CGCTGGTGGT GGCGTACGCC
ATTGCCGGCA CGGTGATGCG CGACCTGATG ACCGAGCCGG TCGGCAAGGG CAAGGGCAAA
GATGGGAAGT TAAGGGATGT CTACCTGGGC GATATCTGGC CGACCAGCGA TGAGATCGAC
AAGCTCATGA AGTACGCCAT GAATGGCAAG GCCTTCCGCG CCAATTACGC CAAGGTCAAG
ACCGAACCCG GCAAGCTCTG GGAAAACATC AAGGGGGTGA CAGGCACCTC CTACACCTGG
CCCACCAGCA CCTACATCGC CGAGCCGCCC TTCTTCAAGG ACTTCACCAT GGCCGCGGGC
GAGGCCGGCA GCGTGTCGGT CAAGGGCGCG CGCATCATGG CGCTGTTTGG CGACTCCATC
ACCACCGACC ATATTTCGCC TGCCGGCTCC ATCAAGGCCA GCTCGCCGGC AGGCCTGTGG
CTGCAGGCGC ATGGCGTGCA GAAGGCCGAC TTCAACAGCT ACGGCGCACG CCGCGGCAAC
CACGACGTGA TGATGCGCGG CACCTTCGCC AATGTGCGCA TCAAGAACCT GATGATTCCG
CCGGATGCAA CGGGCTCGCG GGAAGAAGGC GGGGTGACGC TGTTTCAGCC CGGCGGCGAC
AAGATGTTCA TCTACGACGC CGCCATGAAG TACATGGCCG AAGGCACGCC GACGGTGATT
TTTGCCGGCG AGGAATACGG CACCGGTTCG TCGCGCGACT GGGCGGCCAA GGGCACCCAG
CTGCTGGGCA TCAAGGCCGT GGTGGCCCGC AGCTTCGAGC GCATACACCG CAGCAATCTG
GTGGGCATGG GCGTGCTGCC CTTGCAGTTC AAGCCCGGCG AATCGTGGCA GACCCTCAAC
CTCACCGGCT CCGAGGTCAT CGATGTGTTC CCTCACCCCG AACTGAAACC CCAGAGCGAC
GCCATGCTGG TCATCACCCG CGCCGACGGC TCGCGTGAAG AGGTCAGCGT GATCCTGCGC
ATCGACACCC CGATCGAAGT GGACTACTAC CGCAACGGCG GCATTCTTCC TTTCGTGCTC
CGGCAGCTCC TGGCTGCATG A
|
|---|
| Protein sequence | MAKSPTPVRP SHAFAATRKT FKTASGKTGQ FYSLPALAKQ FPKVARLPVS LRIVLESVLR
NCDGKKVTAE HVGEVANWAP RADRTQEIPF VVSRVVLQDF TGVPLLADLA AMRSVALKLG
KNPKSIEPLV PVDLVVDHSI MVDYYGKKNS LDLNMKLEFQ RNRERYEFMK WGMQAFDTFG
VVPPGFGIVH QVNLEYLARG VHKTKEGVYY PDSLVGTDSH TTMINGIGVV AWGVGGIEAE
AAMLGQPVYF LTPDVVGFEL TGRLREGVTA TDLVLRVTET LRKEKVVGKF VEFFGEGTRT
LALPDRATIG NMAPEYGATM GFFPVDEKTI EYFKGTGRTK DEIEAFEAYF RAQGLFGVAK
AGEIDYSQVV KLDLGDVTPS LAGPKRPQDR IELGNVASQF ASLFSKPIAE NGFNQPAAML
ATRHLLRHTD DGRADTLPGA LPTPMGAPRS VVEMESNRPT LASGTAAHSE VPTPESKKAG
ISIGNGDVLI AAITSCTNTS NPSVLLAAGL LAKKAVEAGL KVQPHIKTSL APGSRIVTEY
LTETGLLPYL EKLGFALAGY GCTTCIGNAG DLTPEINEAI TKSDLVCAAV LSGNRNFEAR
IHPNLKANFL ASPPLVVAYA IAGTVMRDLM TEPVGKGKGK DGKLRDVYLG DIWPTSDEID
KLMKYAMNGK AFRANYAKVK TEPGKLWENI KGVTGTSYTW PTSTYIAEPP FFKDFTMAAG
EAGSVSVKGA RIMALFGDSI TTDHISPAGS IKASSPAGLW LQAHGVQKAD FNSYGARRGN
HDVMMRGTFA NVRIKNLMIP PDATGSREEG GVTLFQPGGD KMFIYDAAMK YMAEGTPTVI
FAGEEYGTGS SRDWAAKGTQ LLGIKAVVAR SFERIHRSNL VGMGVLPLQF KPGESWQTLN
LTGSEVIDVF PHPELKPQSD AMLVITRADG SREEVSVILR IDTPIEVDYY RNGGILPFVL
RQLLAA
|
|---|
| |