| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3588 |
|---|
| Symbol | |
|---|
| ID | 4013734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3786157 |
|---|
| End bp | 3786822 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 637943247 |
|---|
| Product | putative cyclase |
|---|
| Protein accession | YP_550391 |
|---|
| Protein GI | 91789439 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1878] Predicted metal-dependent hydrolase |
|---|
| TIGRFAM ID | [TIGR03035] arylformamidase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.190049 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAGCCA GAGTCCTACC ATCCACCACC GCAAAGCCCT TGAGGCTTTG GGACATCTCG
CCCCCCGTGG CGCCAGGCTC GCCGGTTTTT CCGGGCGACA CGCCCTACCA GCAGCAATGG
GCCGCGAGCA TCGCGCCGGG CTGCCCGGTG AACGTCAGCA CCCTCACCTT GTCGCCGCAC
ATCGGCGCAC ATGCCGACGC ACCGTTGCAC TACGACCCGC AGGGCGCCAC CATCGGTGCG
GTCGATCTCA CGCCCTATAT CGGGCCATGC CGCGTCATTC ATGCCATCGC CAAAGGGCCG
CTGATCGAGT GGGAGCACCT GGCGCATGCC GTACACGACC TGCCGCCGCG CGTGCTGGTT
CGCACCTACG CGCGCATGCC AGTCGAGCGC TGGGACCCCA CGCTCGCGGC CTACGCGCCC
GAGACCGTTG AGCGCCTCGC CGCACTCGGC GTCAAGCTGA TCGGCATCGA CACCGCCAGC
ATCGACCCGG CCGGAAGCAA AACCCTGGAC AGCCACCAGG TGATCCGCCA GCGCGGCCTG
CGCGTGCTGG AAAACCTGGT GCTCGACGAG GTGCCCGAAG GCGACTACGA ACTGATTGCC
CTGCCGCTCA AGCTGATGAC GGCCGATGCC TCCCCCGTTC GCGCAGTCTT GCGCGAACTC
CCCTGA
|
|---|
| Protein sequence | MTARVLPSTT AKPLRLWDIS PPVAPGSPVF PGDTPYQQQW AASIAPGCPV NVSTLTLSPH
IGAHADAPLH YDPQGATIGA VDLTPYIGPC RVIHAIAKGP LIEWEHLAHA VHDLPPRVLV
RTYARMPVER WDPTLAAYAP ETVERLAALG VKLIGIDTAS IDPAGSKTLD SHQVIRQRGL
RVLENLVLDE VPEGDYELIA LPLKLMTADA SPVRAVLREL P
|
|---|
| |