| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3578 |
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| Symbol | |
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| ID | 4013763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3779501 |
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| End bp | 3780961 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637943240 |
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| Product | permease for cytosine/purines, uracil, thiamine, allantoin |
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| Protein accession | YP_550384 |
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| Protein GI | 91789432 |
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| COG category | [F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG1953] Cytosine/uracil/thiamine/allantoin permeases |
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| TIGRFAM ID | [TIGR00800] NCS1 nucleoside transporter family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.190049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACATTC GCAACCCATC GCCCGACCTT TACAACGAAG ACCTGGCCCC GGCAAAAACG
CGGAACTGGG GCACCTTCAG CATCTTCAAT GTGTGGACCT CGGACGTGCA CAGCCTCTGG
GGTTATTACC TGGCAGCCAG CCTGTTCCTG CTGTGCGGCA GTTTCACCAA CTTTCTGCTG
GCCATCGGCC TGAGCTCGAT GGTGATCTTT TTCCTGATGA ACCTGGTCGG CTATGCCGGC
GTTAAAACCG GCGTTCCCTA CCCGGTGCTG GCCCGCGCCT CCTTCGGCGT GTGGGGTGCC
AACCTGCCCG CGCTGGTGCG TGCGGTGGTG GCCTGCTTCT GGTACGGCGC ACAAACTGCC
GCGGCCTCGG GCGCCATCGT GGCCCTGCTC ACCCGCTCCG ATGCCATCAT GGCGTTTCAC
AAATCAACGC ATATGCTGGG CCATTCGGGC CTGGAGGTGA TTTGCTTCGT CGTCGTCTGG
GCCTTGCAGC TGCTGATCAT CCAGAACGGC ATGGAAACCG TGCGCAAGTT CCAGGACTGG
GCCGGCCCGG CGGTGTGGGT GGCCATGCTG GTGCTTGCCG TGGGCCTATG CGTCAAGGCC
GGCGGCTTCT CGTTTGACCA CGGCATTCCG CAGGATGTGC TGCTGGCCAA GACCAAGGAT
GCCGGCGTCC CCGGCGAGCC CGGCTCGTTC TGGGCACTGA TGGCCGTGGG CGCCACCTGG
ATCACCTACT TCGCCGCGCT GTACCTGAAC TTCTGCGATT TCTCGCGTTA TGCCAAAGAC
AAGGCCACCG TCAAGAAAGG CAACCTCTGG GGCCTGCCGA TCAACCTGAT CCTGTTCTCG
CTGGTGGCTG GCGTAACGAC GATTGCCGCC TTCAAGGTGT ATGGCGAGGT GCTGCTGCAC
CCCGAGCAGA TTTCCGCCAA GTTCGACAGC TGGTTCCTGG CGCTGCTGGC CGCGCTGACC
TTTGCCGTGG CGACGCTGGG CATCAACGTG GTGGCCAACT TCGTCTCGCC CGCCTTTGAC
TTTGCCAATG TGTTCCCGCG CAAGATCAGC TTCAAGACCG GCGGCTACAT CGCGGCAGGC
ATCGCGCTGG TGCTCTACCC GTTTGCGCCC TGGGAAGGCA ACGCGGCAAC GTTTGTCGGC
GCCATCGGCG CCACCATGGG GCCGCTGCTG GGCATCATCC TGGTGGACTA CTACCTGATC
GCCAAAGGTG AGGTCAACGT GGAAGCGCTC TACCACGAGG ACGGCGAATA CCGCTACCAG
GGCGGCTGGA ACCCCAATGC CCTCATCGCC ACCTTCATTG GCGCAATGTT CTCCAGCATA
TTGCCCAACT TCACCAGCCT GCTGCCGTCC TGGTGGGGCA TTTATGGCTG GTTCTTTGGC
GTGGCCATTG GCGGCATTGC CTATTACGCG CTGGCCATGG CCATGCCCCG GGCGGCGGCT
GCGGCACACG CCAAGGCCTG A
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| Protein sequence | MDIRNPSPDL YNEDLAPAKT RNWGTFSIFN VWTSDVHSLW GYYLAASLFL LCGSFTNFLL
AIGLSSMVIF FLMNLVGYAG VKTGVPYPVL ARASFGVWGA NLPALVRAVV ACFWYGAQTA
AASGAIVALL TRSDAIMAFH KSTHMLGHSG LEVICFVVVW ALQLLIIQNG METVRKFQDW
AGPAVWVAML VLAVGLCVKA GGFSFDHGIP QDVLLAKTKD AGVPGEPGSF WALMAVGATW
ITYFAALYLN FCDFSRYAKD KATVKKGNLW GLPINLILFS LVAGVTTIAA FKVYGEVLLH
PEQISAKFDS WFLALLAALT FAVATLGINV VANFVSPAFD FANVFPRKIS FKTGGYIAAG
IALVLYPFAP WEGNAATFVG AIGATMGPLL GIILVDYYLI AKGEVNVEAL YHEDGEYRYQ
GGWNPNALIA TFIGAMFSSI LPNFTSLLPS WWGIYGWFFG VAIGGIAYYA LAMAMPRAAA
AAHAKA
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