Gene Bpro_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3563 
Symbol 
ID4013787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3762543 
End bp3763604 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID637943225 
Producthypothetical protein 
Protein accessionYP_550369 
Protein GI91789417 
COG category[S] Function unknown 
COG ID[COG5397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.297998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCCTGC ATGCTGAACT TCCCCTTTCT GCCCAGACGG CTTATGCCCA ACTGGCGGAC 
GTGGCGACTT CGCTGGAGCT AAACCGCAGC ATCGAAAACC TGCATGGCAG TTTTTCGCGC
AAGACGGTGC AGGGTGCGGT GTACTGGTAT TTTTCCTATC GCGACCTGAA CGGACAATTG
CGCCAGCTCT ATGTCGGGCC CGACACCGAT GCCGTCCGCA CGGCGGTCGA GCGCGCCCGG
AACCCCACCA TCAAACCGGA CGCGGCCCTG TCGCCGCTAG CCAAGGCCGC AGTGGCTCTC
GGGTGCGCCC CGGCCCTGCC CAAGCATGTA CGCGCGGTCC GTCGCCTGTC CGACTATGGT
TTTTTTCGCG CCGGCGGGGT GTTGGTCGGC ACGCACGCTT TCATCGCTCT TGGCAACATG
CTGGGCGTCA AATGGTTTGC TGGCGGGGCG ACTACCGACG TGGATTTCGC GCACGCCGGC
AAGAATATCT CGGTCGCGCT GCCGGCGAAT GTGCAGATTG ACGTGCATGC CGCGCTCACG
AGCTTTGAAC AGGGCTTCAT ACCGCTGGTC CAGCTCAGTG GAGGTGCGGG TGCTTCCTAC
AAGCTCAGCG GGGATCCGGA ATTCCAGATC GATTTCCTGA CTTCGGCTCA CCGGGGTGGC
GACGGGCCTA TCGTCATACC GAACCTCAAT GTCGGCCTGC AGCCGTTGCG TTTCATGGAG
TTTTCCCTCG AAAGAGTGAC GCAGGCGGTG CTGGTTGACC GCAACGGCGG CGCCGTGACG
GTGAGTATTC CCGCGCCGGA ACGTTACGCG GTGCACAAGC TGCTGATCGT GGGTGAGCGG
TCGGGGGCCA TGCGGACCAA GGCCAACAAA GACTTGCAGC AGGCAGCGGC CTTGTTTGAT
TACCTGCTGG CGACGCAGCC GGAAAGTCTG CATGATGCCT GGCGCGACGC GCTGGATCGC
GGCCCTGACT GGCGCAAACG GGCGCTGGAG GGTCTGATTG CCCTGCAGCG GGTGCATCCC
GAGCTCAAGT TGGGAGAGAT GTTGACAGGA GTCGTGACGT GA
 
Protein sequence
MLLHAELPLS AQTAYAQLAD VATSLELNRS IENLHGSFSR KTVQGAVYWY FSYRDLNGQL 
RQLYVGPDTD AVRTAVERAR NPTIKPDAAL SPLAKAAVAL GCAPALPKHV RAVRRLSDYG
FFRAGGVLVG THAFIALGNM LGVKWFAGGA TTDVDFAHAG KNISVALPAN VQIDVHAALT
SFEQGFIPLV QLSGGAGASY KLSGDPEFQI DFLTSAHRGG DGPIVIPNLN VGLQPLRFME
FSLERVTQAV LVDRNGGAVT VSIPAPERYA VHKLLIVGER SGAMRTKANK DLQQAAALFD
YLLATQPESL HDAWRDALDR GPDWRKRALE GLIALQRVHP ELKLGEMLTG VVT