Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3554 |
Symbol | |
ID | 4013778 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3754230 |
End bp | 3754745 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943216 |
Product | superoxide dismutase |
Protein accession | YP_550360 |
Protein GI | 91789408 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG2032] Cu/Zn superoxide dismutase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.642978 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.247145 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAATCCC GTTTGACACT GCTTGCCAGC GCCCTTGTTC TGACAGCCTG CGCCTCCATG ACCAGCGGCC CGCGCGCCGT GGCCCAGCTC CAAAGTACCA CGGGCAACAC CGCCACCGGC ACCGTCAGCT TTACCAAGAG CGGGGACAAG GTGGTCGTGA AGGGTGAAGT GCGCGGCCTC AAGCCCAACG CCGAGCACGG CTTTCACGTG CATGAAAAAG GCGACTGCTC CAGTGGCGAC GGCTTGAGCG CGGGCGGCCA TTTCAACCCC GATGGCAAGC CCCATGGAAA TCATTCCGAC ATGGCTCACC ATGCCGGCGA TTTGCCCAGC CTGAAAGCCG ATGCCAGCGG CGTCGCGAAA TTCAGCTTTG AAACCACCTC CATCGCCGTC GGCAGCGGCC CCAGCGACGT GACGGGCCGC GGGCTGATTG TTCACCGTGA CCCGGACGAT TACAAGACCC AACCCACCGG CAACGCCGGC CCACGGCTGG CTTGCGCTGT GATCGCGCGG GGCTGA
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Protein sequence | MKSRLTLLAS ALVLTACASM TSGPRAVAQL QSTTGNTATG TVSFTKSGDK VVVKGEVRGL KPNAEHGFHV HEKGDCSSGD GLSAGGHFNP DGKPHGNHSD MAHHAGDLPS LKADASGVAK FSFETTSIAV GSGPSDVTGR GLIVHRDPDD YKTQPTGNAG PRLACAVIAR G
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