| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3550 |
|---|
| Symbol | |
|---|
| ID | 4013774 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3749980 |
|---|
| End bp | 3750642 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637943212 |
|---|
| Product | 2-keto-3-deoxy-phosphogluconate aldolase |
|---|
| Protein accession | YP_550356 |
|---|
| Protein GI | 91789404 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
|---|
| TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.50082 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.153427 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATGTAA ATCTGGATGT CAGTGGCAAG CTGACGGCCT TGCAGGTCAT GCGGGATGCG
CCCGTGATTC CCGTGATTGT GCTGACCGAC GTCAATAAGG CGGTTCTACT GGCGCGCGCG
CTCGTGGCGG GTGGCATCCG CATGCTGGAG GTCACCCTGC GCACGCCGCA GGCGCTGGCC
TGCATCGAGG CGATTGCGCG CGATGTGCCT GAAGCCGTGG TCGGCGCGGG CACGGTGCGA
AGCGCCGCCG ATGCGCAGGC CTGTGCGATG GCCGGCGCCC GTTTTGCCGT GAGTCCGGGC
TATACCCACT CAGTGGGCCA GGCCTGCCGT GATGCAGGCT TGCCCCTGCT GCCCGGCGTG
GCGACTGGCA GCGAGATCAT GATGGCGCAG GAAGACGGGC TGACCGAGCT CAAGTTTTTC
CCGGCCATGC AGGCCGGCGG TCCGGCCATG CTCAAGGCCT GGAGCGGCCC GTTTGGCGAT
GTGAAGTTTT GCCCGACCGG CGGCGTCTCA ACGGCCAATT CCGCCGAGTT TCTGGCGTTG
CCCAATGTGG TTTGTGTTGG CGGCTCCTGG CTCACGCCAG CGGACGCGCT GGCGCGCGGC
GACTGGGTAC ACATCACTGC GCTGGCGCAG CAGGCCTGCC AGTTGAAGCG GCAGGCTACC
TGA
|
|---|
| Protein sequence | MDVNLDVSGK LTALQVMRDA PVIPVIVLTD VNKAVLLARA LVAGGIRMLE VTLRTPQALA
CIEAIARDVP EAVVGAGTVR SAADAQACAM AGARFAVSPG YTHSVGQACR DAGLPLLPGV
ATGSEIMMAQ EDGLTELKFF PAMQAGGPAM LKAWSGPFGD VKFCPTGGVS TANSAEFLAL
PNVVCVGGSW LTPADALARG DWVHITALAQ QACQLKRQAT
|
|---|
| |