| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3529 |
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| Symbol | |
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| ID | 4013792 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3731459 |
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| End bp | 3732835 |
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| Gene Length | 1377 bp |
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| Protein Length | 458 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637943191 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_550335 |
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| Protein GI | 91789383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00601615 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.181904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AACTACTTGC CACAGCGGCG TTCATGACCA CGGCGCTTTT AGCCGGCGGC
CATGCAGCAG CCCAGGAGAA ACTCACCGTC TGGTGGGTCA AGGGCTTCTA CAAGGCCGAA
GACGATGCCC TGTTTGCGGC CATCAAGAAG TACGAAGACA AGCACAAGGG TGTCAAGATC
GAGCTTTCGC AATACCCGAT TCAGGACATG ATTCCGAAGA CCGTGGCGGC GCTCGACTCG
GGCAACCCGC CCGACGTGGC TTATGCGGAC GTCTATGACT TCCAGGTCAC GGGCAAGTGG
GCTTTCGACG GCAAGCTCGA AGACATCAGC AGCGTGATCA ATCCCATGCG CGCCAAGTTC
GCGCCCAACA CGGTCGAGAC CGCCTTCCTG TACAACGACC AGGCCAAGAC GCGGGCGTAC
TACGCCTTCC CGATGAAGCA GCAGACCATG CACATCCAGT ACTGGGCTGA CATGCTGGCG
GAGGCCGGGT TCAAGGAGTC GGACATTCCG ACGGCCTGGA AGGACTACTG GTCCTTCTGG
TGCGACAAGG TGCAGCCGGC CTATCGTCAG AAAAGCGGCA ACCGCACTTT CGGCATCGGC
CAGCCGCTGG GCGTGGATTC CAGCGACTCG TTCTACTCCT TCCTCACGTT CATGGACGCC
TATAACGTGA GCCTGGTCAG CGACAGCGGC AAGCTGCTGG TGGATGATCC CAAGGTGCGC
GCCGGCCTCA TCGGCGCCCT GACCGATTAC ACCCAGATTT ACGCCAGGGG CTGCACGCCA
CCGTCGTCGA CCAGCTGGAA AGACCCGGAC AACAACGTCG CCTTCCACAA CAAAACGACC
GTCCTCACCC ACAATGCGAC CATCTCGATC GCGGCCAAAT GGCTCGATGA CATGAACAAC
GCCGCCTTGA AGCCCGAGGA TCGGGAGATC GCGAAGAAGA ACTACACGGA GCGCATCCGC
ACCGCCGGTT TCCCGAGCAA GCCCGATGGC AGCAAGATGG TCTATCGTGC CGCGATCAAG
ACCGGCGTGG TTTTCAGCCA GGCCAAGAAC AAGGCCCGCG CCAAGGAGTT TGTGGCCTTC
CTGCTGCAGG ATGAAAACCT CACGCCGTAC GTCGAGGGCT CGCTGGGCCG CTGGTTCCCG
GTGATGAAGG CGGCGCAGCA GCGCCCGTTC TGGAAAGCCG ATCCGCATCG CACAGCCGTG
TACAACCAGT TCACGGCCGG CACGGTGAAT TTCGAGTTCA CCAAGAACTA CAAGTTCACC
GTTCTCAACA ACGAGAACGT CTGGGCCAAG GCCGCGAACC GGGTTCTCAA CGAGAAAGTG
CCGGTTGACA AGGCGGTCGA CGAAATGATC GCCCGCATCA AGACCGTCGC GAACTAA
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| Protein sequence | MKFKLLATAA FMTTALLAGG HAAAQEKLTV WWVKGFYKAE DDALFAAIKK YEDKHKGVKI
ELSQYPIQDM IPKTVAALDS GNPPDVAYAD VYDFQVTGKW AFDGKLEDIS SVINPMRAKF
APNTVETAFL YNDQAKTRAY YAFPMKQQTM HIQYWADMLA EAGFKESDIP TAWKDYWSFW
CDKVQPAYRQ KSGNRTFGIG QPLGVDSSDS FYSFLTFMDA YNVSLVSDSG KLLVDDPKVR
AGLIGALTDY TQIYARGCTP PSSTSWKDPD NNVAFHNKTT VLTHNATISI AAKWLDDMNN
AALKPEDREI AKKNYTERIR TAGFPSKPDG SKMVYRAAIK TGVVFSQAKN KARAKEFVAF
LLQDENLTPY VEGSLGRWFP VMKAAQQRPF WKADPHRTAV YNQFTAGTVN FEFTKNYKFT
VLNNENVWAK AANRVLNEKV PVDKAVDEMI ARIKTVAN
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