| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3527 |
|---|
| Symbol | |
|---|
| ID | 4013790 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3729578 |
|---|
| End bp | 3730429 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637943189 |
|---|
| Product | binding-protein-dependent transport systems inner membrane component |
|---|
| Protein accession | YP_550333 |
|---|
| Protein GI | 91789381 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0395] ABC-type sugar transport system, permease component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.16619 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.170584 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA TCACCTTCAA GACTGTGGCC ACCGAGGCCA AGCTGCTGCT GATCGGCATT
CCCGTGCTCT TGTGGACCAT CATTCCGATC TACCACATGG TGCTGTTCGC CATCTCGCCG
CGCGACCAGG CGACCTCGGG CCGGCTCTGG CCGAAGAACC CGACGCTGGA CAACTTCTCT
TTTGTTTTTC ATCAGAAGCA CTTCTACCTC GACCACTTCT GGGTGCAGAT GGGCAACTCC
CTGGTGATTG CGCTGTCGGT CGGTTTCCTG ACGCTGGCCG TGTCTACGGC GGCGGCGTTT
GCGATCAGCC GGCTCAGGGT TCCCGGCGGC CGCACGGTCA TGAACATGGC CTTGTTCACC
TACTTCATTC CGGCGGCATT CCTGGCCGTG CCCATGTACA AGACCATGGG CAACTACGGC
CTGCTCAACA GCCAGTGGGC GCTGATCCTG GCGATGGTGA CGATCGCCTC GCCGTATTGC
ATCTGGGTGC TCAAGCAGGC CTCCGACAAG CTGCCGTACG AACTCGACGA GGCCGCCAAG
ATGGATGGTG CAACGGCGCT GCAGCTTTTC CGCCTGGTCT ACCTGCCGCT GATGGTGCCA
TCGCTCGTTG CCGTGGGTAC CTACGCGTTG CTGCTGGCCT GGAACGAGTA CCTGTATGCG
TTCCTGCTGC TGTCCAACGA CACCAGTGTC ACGCTGGCCG TGGCGCTCGG CAACTTCCTG
TCGGCCGACG ATTCGCCGTG GGAACTGCTG ATGACAACAG GCCTGATCTA CGCGCTGCCG
CCGGCGGCAA TCTATTACAC ATTCAAGCGC TACATGGTGT CTGGCCTCAC GGCCGGCGCT
GTCAAGAGCT GA
|
|---|
| Protein sequence | MKRITFKTVA TEAKLLLIGI PVLLWTIIPI YHMVLFAISP RDQATSGRLW PKNPTLDNFS
FVFHQKHFYL DHFWVQMGNS LVIALSVGFL TLAVSTAAAF AISRLRVPGG RTVMNMALFT
YFIPAAFLAV PMYKTMGNYG LLNSQWALIL AMVTIASPYC IWVLKQASDK LPYELDEAAK
MDGATALQLF RLVYLPLMVP SLVAVGTYAL LLAWNEYLYA FLLLSNDTSV TLAVALGNFL
SADDSPWELL MTTGLIYALP PAAIYYTFKR YMVSGLTAGA VKS
|
|---|
| |