Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3524 |
Symbol | |
ID | 4013826 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3727127 |
End bp | 3727945 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637943186 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_550330 |
Protein GI | 91789378 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.382394 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.103507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATTT TCATGAGCAC TCCCACGAGC ACTCCCACGA GCACTCCCAT GAGTACTTCG AATCCCTTCC GGCTGGACGG CCGGCTCGCG CTGATCACCG GATCTTCCGC CGGCATCGGT TTCGCGCTGG CGCGCGCGCT TGGGCAGGCC GGCGCCACGC TGGTCCTCAA TGGCCGGGAC GCCGGCAGGC TGGAACAGGC GGCAGGCGTG TTGCGCAGCG AAGGGCTGCA GGTCCACACG CGGATGTTTG ATGTCACGCA GGCCGAGGCC GTAGAGGCCG CGGTGCAGGA TATCGAGAGC ACCCTCGGCG CCATCGAGAT TCTCGTGAAC AACGCGGGAA TGCAGCGCCG CATGCCGCTG CACGAATTTT CCACCGAGCA GTGGCATGAG CTGATGCGCA CCAACGTCGA CAGCGTGTTC TTCATGGGCC GGGCCGTGGC ACGCAAAATG ATAGAGCGCC GCCGCGGCAG GATCATCAAC GTCTGCTCGG TGCAAAGCGA GCTGGGCCGG CCCAACATCG CACCCTATAC GGCGAGCAAG GGTGCGGTCA AGATGCTGAC CAAAGGCATG GCGATTGACT GGGGCCCGCA TGGCATCAAT GTCAACGGCC TCGGGCCCGG CTATTTCAGG ACCGAACTCA ACGAGAAACT GGTGGCCGAC GAGCAGTTCA ATGCCTGGCT GATCGGACGC ACGCCCAGCC GGCGCTGGGG CAACGTCGAG GACCTGGGTG GCGCGGCCGT GTTCCTGGCC AGCGATGCAT CGAGCTTTGT CAATGGCCAC ATCCTGTACG TCGACGGCGG CGTGACCGCC ACCCTCTGA
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Protein sequence | MSIFMSTPTS TPTSTPMSTS NPFRLDGRLA LITGSSAGIG FALARALGQA GATLVLNGRD AGRLEQAAGV LRSEGLQVHT RMFDVTQAEA VEAAVQDIES TLGAIEILVN NAGMQRRMPL HEFSTEQWHE LMRTNVDSVF FMGRAVARKM IERRRGRIIN VCSVQSELGR PNIAPYTASK GAVKMLTKGM AIDWGPHGIN VNGLGPGYFR TELNEKLVAD EQFNAWLIGR TPSRRWGNVE DLGGAAVFLA SDASSFVNGH ILYVDGGVTA TL
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