| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3523 |
|---|
| Symbol | |
|---|
| ID | 4013825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3726010 |
|---|
| End bp | 3727059 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 637943185 |
|---|
| Product | alcohol dehydrogenase GroES-like protein |
|---|
| Protein accession | YP_550329 |
|---|
| Protein GI | 91789377 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.538037 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.114116 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCGCAC TTGTTTGCCA CGCTCCGCTG GATCTGCGCT TTGACACGTT CGTGTCCGAC
CAGCCAGGCC CGACCGAGCT CGGCGTGCGC ATTGCCTATG GCGGCATTTG CGGCTCGGAC
CTGCACTACT TCCAGCACGG CGGCTTTGGC ACCGTGCGCA TCCGGGAGCC CATGGTGCTG
GGGCACGAGG TGTCGGGCGC GATCGAGTCG GTGGGCAGCG CCGTCACACA ATTCCAGGTT
GGCCAGCGCA TTGCGGTGTC GCCCTCGCGG CCCTGCGGCA CCTGCCGCTA CTGCAACCTG
GGTTTGCAGA ACCACTGCAT GGAAATGCGC TTTTACGGCA GTGCCATGCG CTTCCCCCAC
GTGCAGGGCG CGTTTCGCGA GCACCTGGTG ATTGATGCCA GCCAGGCCCA TCTGGTCGCC
GACGAGCTGC CGCTGGCCGA GGCGGCGCTG GCCGAGCCGC TGTCGGTCGG CCTGCATGCC
ATCACACGCG CCGGCTCGGT GTTTGGCAAG CGCGTGCTGG TCACGGGCTG CGGTCCGATC
GGCTTGCTGT TGATTGCCGG CCTGCGGCGT GCCGGTGCTG CGCACATCAT TGCAGCCGAC
ATTGCCGACG TGCCCCTGGT CTGCGCCGCC ACGCTGGGTG CGGACGAGAC CATCAACCTA
GCCCGTCACC CCGGCGGCCT GGCGCCTTAT GCGCTCAACA AGGGCATGAT CGAGGTGATG
TTCGAAGCTT CCGGCAGCGA CAAGGCCTTG CGCGGCGGGC TGGATGTGAT GGCGCCGCGC
GGCGTGGTCG TGATCGTGGG CCTGGGCGGC GATATCAGCG TGCCGATGAA CCTGCTGGTG
GCCAAGGAAC TGGATGTGCG CGGTACCTTC CGTTTTCATC AGGAGTTTGC GGTCGCGGTG
CGCTTTCTCA ACCAGCGCCT CATCGACGGC CGGCCGGTGA TCACGCACAC CCTGAAGTTC
GACCAGGCGG CGGATGCCTT CAAGCTGGCG GGCGACAAGG GCCGGGCGCT GAAAGTGCTC
ATCGATTTCA ATGCGCCGGC GGCGGCATGA
|
|---|
| Protein sequence | MRALVCHAPL DLRFDTFVSD QPGPTELGVR IAYGGICGSD LHYFQHGGFG TVRIREPMVL
GHEVSGAIES VGSAVTQFQV GQRIAVSPSR PCGTCRYCNL GLQNHCMEMR FYGSAMRFPH
VQGAFREHLV IDASQAHLVA DELPLAEAAL AEPLSVGLHA ITRAGSVFGK RVLVTGCGPI
GLLLIAGLRR AGAAHIIAAD IADVPLVCAA TLGADETINL ARHPGGLAPY ALNKGMIEVM
FEASGSDKAL RGGLDVMAPR GVVVIVGLGG DISVPMNLLV AKELDVRGTF RFHQEFAVAV
RFLNQRLIDG RPVITHTLKF DQAADAFKLA GDKGRALKVL IDFNAPAAA
|
|---|
| |