Gene Bpro_3500 details

Gene Information

• Locus tag: Bpro_3500
• ID: 4013841
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas sp. JS666
• Kingdom: Bacteria
• Replicon accession: NC_007948
• Strand: +
• Start bp: 3698570
• End bp: 3699166
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 67%
• IMG OID: 637943162
• Product: ubiquinol-cytochrome c reductase, iron-sulfur subunit
• Protein accession: YP_550306
• Protein GI: 91789354
• COG category: [C] Energy production and conversion
• COG ID: [COG0723] Rieske Fe-S protein
• TIGRFAM ID: [TIGR01416] ubiquinol-cytochrome c reductase, iron-sulfur subunit

Plasmid Coverage information

• Num covering plasmid clones: 21
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.464375
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

GTGTCACACA CGGCAACCCC TCCAGACCCT GCACGTCGCG TGTGGCTCAC GGCAGCTTCT 
GTGGCTGGCG GCGCGGGTAT CGTCGCAACG AGCGTACCCT TCGTGGTTTC CATGGCCCCC 
AGCGAGCGAG CACGCGCGCT CGGCGCGCCC GTAGAGATCG ACGTTGGGCC CATCAAGCCA 
GGCGAGCTAC AGACCGTGGA GTGGCGCGGC AAACCGGTGT GGGTGCTGCG CCGCACTACC 
GACATGCTCG CAACCTTGCG CAGCCATGAC GATTTGCTCA GCGACCCGCA TTCGAGCCGT 
CGGGGGCAGC AGCCCGATTA CGCCCGCAAC GACCTTCGCT CGGTCAAGCC GGACATCGCC 
GTACTGGTGG CGATCTGCAC CCACCTGGGT TGCGTCCCGT CCTTCAGGCC AGTGCCGGGT 
ACTGCCGACA TCGGCGCGTC ATGGCCGGGC GGGTTTTATT GCCCGTGCCA TGGCTCGAAG 
TTCGATCTCG CCGGCCGGGT TTTCAAGAAC GTGCCCGCTC CCAGCAACCT CGAGGTGCCG 
CCGCACCACT ACACCGGCGA GTCGAAACTA CTCATCGGCG AGGGGCCGCG GGCCTGA 

 

Protein sequence

MSHTATPPDP ARRVWLTAAS VAGGAGIVAT SVPFVVSMAP SERARALGAP VEIDVGPIKP 
GELQTVEWRG KPVWVLRRTT DMLATLRSHD DLLSDPHSSR RGQQPDYARN DLRSVKPDIA 
VLVAICTHLG CVPSFRPVPG TADIGASWPG GFYCPCHGSK FDLAGRVFKN VPAPSNLEVP 
PHHYTGESKL LIGEGPRA