| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3485 |
|---|
| Symbol | |
|---|
| ID | 4013865 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3685712 |
|---|
| End bp | 3687127 |
|---|
| Gene Length | 1416 bp |
|---|
| Protein Length | 471 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 637943147 |
|---|
| Product | twin-arginine translocation pathway signal |
|---|
| Protein accession | YP_550291 |
|---|
| Protein GI | 91789339 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAACA GAAGAAATTT TTTGACCGGC GCGGGCGCAC TGACCTCCGC CGTGGCCGCA
GCAGCAGTCA GCCGGGTGGC GATGGCCGCC CTGCCGGAAC CGGTCCTGCA GACAAAACCC
GACACCATGC CGCCGCTCGT TCCCGCCACG GGCCGCCCCT ACAACCCGGT GGTCACGCTC
AATGGCTGGA CGCTGCCCTG GCGCATGAAC AATGGCGTCA AGGAATTCCA CCTGGTGGCC
GAACCGGTGG TGCGCGAGAT GTCACCCGGA TTCAAGGCGC ACCTCTGGGG CTACAACGGC
CAGAGCCCCG GCCCGACCAT TGAAGTGGTG GAAGGCGACC GGGTGCGCAT TTTTGTTACC
AACAAGCTGC CCGAGCACAC CAGCATTCAC TGGCACGGCC AGCGCCTGCC CAACGGCATG
GACGGCGTGG CGGGCCTGAC CCAGCCCGCC ATTCCGGTCG GCAAGACCTT TGTCTACGAA
TTCGTGGCCC GGCGCCCGGG CACCTTTATG TACCATCCGC ATGCCGACGA GATGACGCAG
ATGGCCATGG GCATGATGGG CTTCTGGATC ACCCACCCGA AAGCGAAGCA TCCGCTGATC
GACGAGGTCA ACCGTGACTT CGTGTTCCTG CTCAATGCCT ATGACATAGA CCCCGGCGCC
TACACGCCCA AGATCATGAC CATGCTCGAC TTCAACCTCT GGAGCTGGAA CAGCCGGGTC
TTTCCGGGCA TTGACCCGCT GGTGGTGCGC AAGAACGACA AGGTGCGCAT CCGCATCGGC
AACCTGACCA TGACCAATCA CCCGATGCAC CTGCATGGGC ATGAGTTTCT GGTGACCGGC
ACCGATGGCG GCCCCACCCC AAAATCAACC CGCTGGCCCG AGGTGACGAC CGATGTCGCT
GTCGGCCAGA TGCGGCAAAT CGAGTTCCTG GCCGACGAAG AGGGCGACTG GGCTTTTCAC
TGCCACAAGA GCCACCACAC CATGAACGCC ATGGGCCATG ACGTGCCGAC CCTCATTGGC
GTAGACCACC GCAAAGTGGT GAAGGACATC ACCAACGTCA TCCCCGACTA CATGGTGATG
GGCGAGCGCG GCATGGCCGA CATGGCCGAG ATGGAAATGC CTTTGCCGGA CAACACCGAA
AGGATGATGA CCGGCGCAGG CCCCTTCGGC TCAGTCGAAA TGGGCGGCAT GTTCAGCATG
GTCAAGGTAC GCAAAGACCA AAAACCCGGC GACTACAAAG ACCCTGGCTG GTACAAGCAC
CCGGTGGGTG AAGTCGCCTA TGAATGGACA GGTTCGCTGC CCAATCCGGC ACGCTTTGCA
GCCGAGGGCG GCCAATCCAT GAAAGCACAG AACATGCCCC TGAAAGAAGT CGAAGTTCAG
GTCCGCAAGC CCTCCATGGG CAACATGAAG CATTGA
|
|---|
| Protein sequence | MTNRRNFLTG AGALTSAVAA AAVSRVAMAA LPEPVLQTKP DTMPPLVPAT GRPYNPVVTL
NGWTLPWRMN NGVKEFHLVA EPVVREMSPG FKAHLWGYNG QSPGPTIEVV EGDRVRIFVT
NKLPEHTSIH WHGQRLPNGM DGVAGLTQPA IPVGKTFVYE FVARRPGTFM YHPHADEMTQ
MAMGMMGFWI THPKAKHPLI DEVNRDFVFL LNAYDIDPGA YTPKIMTMLD FNLWSWNSRV
FPGIDPLVVR KNDKVRIRIG NLTMTNHPMH LHGHEFLVTG TDGGPTPKST RWPEVTTDVA
VGQMRQIEFL ADEEGDWAFH CHKSHHTMNA MGHDVPTLIG VDHRKVVKDI TNVIPDYMVM
GERGMADMAE MEMPLPDNTE RMMTGAGPFG SVEMGGMFSM VKVRKDQKPG DYKDPGWYKH
PVGEVAYEWT GSLPNPARFA AEGGQSMKAQ NMPLKEVEVQ VRKPSMGNMK H
|
|---|
| |