Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3448 |
Symbol | |
ID | 4013867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3653002 |
End bp | 3653775 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637943111 |
Product | putative cytochrome c |
Protein accession | YP_550255 |
Protein GI | 91789303 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.582918 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAA CGCTCTCTTT CGCGCGCACG CTGGCGGCGC ACGGCTTCCT GGCGTGCATG GTTTGGGCGG CCGCCGGCCC CGCCCTGGCC GCCGCGCCGT TTGAAGACAC CATCGCCCAG CGCACCCTGG CCTGCACCGC CTGCCATGGA CCGCAAGGCC GTGCGGCACC CGACGGCTAC TACCCGCGCC TGGCCGGGAA ACCCGCCGGC TACCTCTACA ACCAGTTGCT CAATTTCCGC GACGGGCGGC GCCACTACGG CCTGATGACG CAGCTGCTGG ACCCGCTGAG CGACGCCTAC CTGATGGAGA TCGCGCAATA CTTTTCAACG CTCGACGTGC CCTACCCCGC GCCGCTGCCC ACCAAGGCCT CCGTCGAGGT CTTGCGCCAC GGCGAGCGCC TGGTGATGCA GGGCGACGCA GCGCGGCAAG TGCCGGCCTG CGTGCAGTGC CACGGCCAGG CTATGACCGG CGTGGCGCCC AACGTTCCGG GCCTGCTCGG CCTGCCGCGC GACTACCTCA ATGCCCAGCT GGGCGCCTGG AAAGCCGGCC AGCGCCGCGC CCACGCGCCT GACTGCATGA AGGACGTGGT GGCACGCCTG TCCCTGGAAG ACATCAACGC GGCCTCGAGC TGGCTGGCCG CGCAGCCGCT GCCCGCCAGC AGCAAACCGG CAAGCGCCTT GCCCGCACTG GCGCCGGGTG CCCGGCCCAT CGACTGCGGC AGCGCGCCGC AAGCGCTGTC CGCCGATGCA GCGCCACCGA AGGCCGTGAA ATGA
|
Protein sequence | MAKTLSFART LAAHGFLACM VWAAAGPALA AAPFEDTIAQ RTLACTACHG PQGRAAPDGY YPRLAGKPAG YLYNQLLNFR DGRRHYGLMT QLLDPLSDAY LMEIAQYFST LDVPYPAPLP TKASVEVLRH GERLVMQGDA ARQVPACVQC HGQAMTGVAP NVPGLLGLPR DYLNAQLGAW KAGQRRAHAP DCMKDVVARL SLEDINAASS WLAAQPLPAS SKPASALPAL APGARPIDCG SAPQALSADA APPKAVK
|
| |