| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3443 |
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| Symbol | |
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| ID | 4013901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3645162 |
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| End bp | 3646622 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637943106 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_550250 |
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| Protein GI | 91789298 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.267273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGCCTA AACACACCCT TGCCATCTTC ATTGTTGCCG GCCTCTCGGC CGGCTGCGCC
GTCGGTCCCG ACTATGTCAG GCCCGACACG CCCATGCCGC AACAGTACCT GGGCCAACCA
GCGGTCGACC AGCGGCACGC CACTGCCCAT GCCGATCTCG TCACCTGGTG GACGGGTTTC
GGTGATCCGC TACTGACTCG ATTCGTCACG CTGGCGGTGG AACAGAACCT CGATCTCGCG
CAGGCATCCG CTCGCGTCAC CCAGGCGCGC GCGGAGCTTG GGGCGGCAAA TGCCGCGTTG
CTGCCTTCCG GCAACGTCAG CGGCCAGGCA GCCAGAGCCT ACCAATCCCT TGAAACGCCT
CTGGGAAAAG TCTTGAGCGC TAGCCCCGGT TTCGACCGTC ACGGCAGTTC TTACGAAACC
AATCTCGGCG CGAGCTGGGA ACTGGATGTA TTCGGAGGCT TGCGTCGTGG AAAGGAAGCG
GCACTTGCCG GGTACCAGGC GTCGGAGGCC GGCGCAGCCG CTACCCGGTT GGCTGTGGCG
GCACAGACCG CCGACACCTA CATCATCATT CGTGGGCTGC AAACCCGCCT CGGCGTTGCC
CGCGGGCAGG TGCAGACGCA GCAGGAATTG CTATCGACCA TCAACCTTCT GTATGGGAAG
GGGTTGGCGG CCGAACTTCA AGTGAGGCAG GCCGAAGGTG CGCTTGCCCA GGTTCGGGCG
TCCGTGCCGG TTCTTGAGGC GGGTCTGGAC GTGGCCATGA ACGCGCTTGA CGTGATGCTG
GGCACGCCAC CCGGAACGCA TCGGATGGAA CTGGCCGATG CTGGCGTCAT CCCTGCTGCC
CCGCAAATCA CTGCTGCAGG CTCTCCGGGT GAGCTGCTAA GGCGCCGCCC TGACCTGATT
GTGGCTGAGC GCCGCCTTGC CGCATCGAAT GCCCGTATCG GTGTCGCCAT TGCCGAGTAC
TACCCCAAAC TCTCTCTGAG TGGGCTGATC GGCAGCGCGA CATCGGTGTC CGGTGGCAAT
CTGTTCACCA GCGGCGCGAG TCAGGCCGCC GGCGTGCTGG GTCTGCGCTG GCGTCTGTTC
GACTTTGGCC GCATCAACGC GCAGATCGAC CAAGCCAGGG GCCAGGAGGC CGAGATGCTG
GCTGCGTATC GGCTTGCCGT ACTGCGGGCA ACTGAGGACG TAGAAAACGC CTTTTCGGCC
TTGGTCAAGC GCGAGGAGCA GGCTGTTGTA CTTGCCCAGG GAGTGGACTC TCTCGGCCGC
GCCCGATCAG CTTCGTTTGC GGCGTATCAA AAAGGGGTAC TCAGTCTGAT CGAAGTCTTG
CAGGCCGACG ACAACCTGCT ACGTGCCTCC GATGCGCGAG CGCAAGCGCA AACGGAATCA
GCACGCGCGG CGGTCGCTAC CTTCAAAGCG CTCGGCGGCG GTTGGCAACC CCAGGAATCC
AGCGCCGTGG CAATTAGATA G
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| Protein sequence | MLPKHTLAIF IVAGLSAGCA VGPDYVRPDT PMPQQYLGQP AVDQRHATAH ADLVTWWTGF
GDPLLTRFVT LAVEQNLDLA QASARVTQAR AELGAANAAL LPSGNVSGQA ARAYQSLETP
LGKVLSASPG FDRHGSSYET NLGASWELDV FGGLRRGKEA ALAGYQASEA GAAATRLAVA
AQTADTYIII RGLQTRLGVA RGQVQTQQEL LSTINLLYGK GLAAELQVRQ AEGALAQVRA
SVPVLEAGLD VAMNALDVML GTPPGTHRME LADAGVIPAA PQITAAGSPG ELLRRRPDLI
VAERRLAASN ARIGVAIAEY YPKLSLSGLI GSATSVSGGN LFTSGASQAA GVLGLRWRLF
DFGRINAQID QARGQEAEML AAYRLAVLRA TEDVENAFSA LVKREEQAVV LAQGVDSLGR
ARSASFAAYQ KGVLSLIEVL QADDNLLRAS DARAQAQTES ARAAVATFKA LGGGWQPQES
SAVAIR
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