| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3431 |
|---|
| Symbol | |
|---|
| ID | 4013889 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3632653 |
|---|
| End bp | 3633582 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 637943094 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_550238 |
|---|
| Protein GI | 91789286 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAAGT TTTCAGCAAT GCAGGCCTTC GTCAGGGTGG TGGAAGCCGG CACCTTCACC
AAGGCCGCCG ACTCCATGGC CATGCCCAAA CCGACGATCA CGCGCCTGAT CCAGACCCTG
GAAAAGGAAC TGGACACCAA GCTGCTGAAC CGCACCACCC GCAAGGTCAC GGTGACGGCC
GACGGCGCGG CCTACTACGA ACGCGCCGGC CGCCTGCTCA GTGAGATGGA AGAACTCGAG
GCGAGCATGT CGCGCGCCAA GGCCAGCCCG CGCGGGCGGC TCAAGGTGGA CATTCCGGCC
TCGCTGGGCA TCGCGGTCAT CATTCCGGCC CTGCCCGATT TTTATGCGCG CTATCCCGAC
ATCCAGCTCG ACCTGGGCGT AAGCGACCGG CCTGTAGACA TCATTGCCGA GAACGTTGAC
TGCGTGGTAC GCGGCGGCGA ACTGATCGAC CAGTCGCTGG TCGCGCGCCG CATTGGGGAG
TTCTATCTGA TGTCATGCGC CTCGCCCGCC TACCTCAAGC GCCATGGCAC ACCCCAGCAT
CCGGCCGAAC TCGAGGACAG CCATCGCATG ATCCGTTACG CCTCTCCACG CAACGGCAAG
CTTTATTCGT TCGAGTACTA CAAGGACGGC GAAACCGTCG AAGTCGGCGG CAACTATCTG
CTGTCGGTCA ACGATTCGCG CGCCGGCGTG GTCGCCGCGC TGGCCGGCCT GGGTGTGCTG
CACACCGCGA CCTTTCAGGT GCAGGATTAC ATCAGCACAG GCGCGCTCGA ACCGCTGTTC
AACGGCTGGT GCACCGAATC GATCCCGCTG CATGTGGTCT ACCCGCCCAA CCGCCACCTG
AGCAACAAGG TGCGTGTCTT CGTGGACTGG GTCGCCGAGC TGTTTGCCAA GCATGACCTG
ATACAGCGCA AGAGCACGCT GCCTGCCTGA
|
|---|
| Protein sequence | MDKFSAMQAF VRVVEAGTFT KAADSMAMPK PTITRLIQTL EKELDTKLLN RTTRKVTVTA
DGAAYYERAG RLLSEMEELE ASMSRAKASP RGRLKVDIPA SLGIAVIIPA LPDFYARYPD
IQLDLGVSDR PVDIIAENVD CVVRGGELID QSLVARRIGE FYLMSCASPA YLKRHGTPQH
PAELEDSHRM IRYASPRNGK LYSFEYYKDG ETVEVGGNYL LSVNDSRAGV VAALAGLGVL
HTATFQVQDY ISTGALEPLF NGWCTESIPL HVVYPPNRHL SNKVRVFVDW VAELFAKHDL
IQRKSTLPA
|
|---|
| |