| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3429 |
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| Symbol | |
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| ID | 4013887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3630047 |
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| End bp | 3631282 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 637943092 |
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| Product | secretion protein HlyD |
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| Protein accession | YP_550236 |
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| Protein GI | 91789284 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCGA TTCAATTACC GGCCAACAAG CGCCGACTTC TGGCCGTTGC TCTGGCCGTG
CTGGCCGTCA TCGGCATTTC TGCCGTCGTC TTCGGCGTGT CCAGCCCGCG CGCCCAGCCC
GGGGCCGCGG TCGAGCCGCC CGCCACCCCG GTGTCGGTGG CGACTGTCGT GCAGAGCGAC
GTGGCCGCCT GGGACGAGTT TTCCGGCCGG CTGGAAGCCG TCGAGCGGGT GGACATCCGT
TCGCGCGTGG CCGGCACCAT CCAGGCCGTG CATTTCCGCG AAGGTGCGCT GGTCAAAAAG
GGCGACCTGC TGCTGACGAT TGACCCGGCC CCTTATGCCG CCGATGTGGA GCGTGCCGAT
GCGCAGGTTG CTGCGGCCCA GGCCCGGGTC ACCCAGGCCA AAGGCGAGCA GGAGCGCTCG
CAGCGCCTGT GGAGCGAGCA GGCCATCTCC AAGCGTGAGT TTGACGAGCG CACCAATGGC
AAGGGCGAAG CAGACGCCAA CCTGCGTGCC GCGCAGGCGG CCCTGCAGAC GGCGCAACTG
AGCCTGGGCT ACACCCAGGT GCGCGCGCCG GTCTCCGGGC GGGTCGGCAA GCTCGAAGTC
ACCGTGGGCA ACCTGGTCGC CGCGGGCCCC GGCGCTCCCG TGCTGACCAC GCTGGTGTCC
GTGAGCCCCA TCTACGCCAG TTTTGACGCC GACGAGCAGG TGGTAGCCAA GGCGCTGAAA
GATGTGCAGG GCAGTGGCGC TGGCAGCAGT GGCCGAAACC TGGAACGCAT TCCCGTGCAG
ATGGGCACTG CGGCCAGCAC CGACACACCA TTTGAAGGCC GGCTGCAGCT GGTCGACAAC
CAGGTCGATG CGAAGAGCGG CACGGTGCGC GCGCGCGCTG TGTTTGACAA CAAGGATGGC
CAGCTCATGC CCGGCCAGTT CGCGCGCATT CGCATGGGCC AGGCCAGCAA AGGCACGGCC
TTGCTGATCA ACGAACGCGC CGTCGGCACG GACCAGAACA AGAAATTCGT GCTGGTGGTG
GGCGCCGACA ACAAGGCGGT GTACCGCGAG GTCACGCTGG GCGCTTCCAT CAACGGCCTG
CGCGTGGTCA AGGGCGGCCT GGTGGCCAAC GAACGCATCG TCGTCAATGG CTTGCAGCGT
ATCCGCCCGG GCGCGCTGGT GGCGCCGCAA CCGGTGGAGA TGTCCGCCAA GACGGAGCTC
AACGCCAAAC CGGTGCAGGT AGCAGCCAAG TCCTGA
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| Protein sequence | MPSIQLPANK RRLLAVALAV LAVIGISAVV FGVSSPRAQP GAAVEPPATP VSVATVVQSD
VAAWDEFSGR LEAVERVDIR SRVAGTIQAV HFREGALVKK GDLLLTIDPA PYAADVERAD
AQVAAAQARV TQAKGEQERS QRLWSEQAIS KREFDERTNG KGEADANLRA AQAALQTAQL
SLGYTQVRAP VSGRVGKLEV TVGNLVAAGP GAPVLTTLVS VSPIYASFDA DEQVVAKALK
DVQGSGAGSS GRNLERIPVQ MGTAASTDTP FEGRLQLVDN QVDAKSGTVR ARAVFDNKDG
QLMPGQFARI RMGQASKGTA LLINERAVGT DQNKKFVLVV GADNKAVYRE VTLGASINGL
RVVKGGLVAN ERIVVNGLQR IRPGALVAPQ PVEMSAKTEL NAKPVQVAAK S
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