| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3418 |
|---|
| Symbol | |
|---|
| ID | 4013915 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3615199 |
|---|
| End bp | 3616242 |
|---|
| Gene Length | 1044 bp |
|---|
| Protein Length | 347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 637943081 |
|---|
| Product | LacI family transcription regulator |
|---|
| Protein accession | YP_550225 |
|---|
| Protein GI | 91789273 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1609] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.612979 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCACG AGGACACGCC AACGGACACC CAGACGCGAC GAACCCGCCG GGGCAGCGGC
GCCGTCACCC TGCATGACGT GGCCAAGCTG GCCGGCGTGG CGCCCATCAC CGCGTCACGC
GCCCTGAACA CCCCCACCCA GGTTTCAGCT GAGGTGCTGA AGAAAGTCAC CGACGCGGTG
CAGCGTACCG GCTACGTGCC CAACCGGCTC GCCGGGGGCC TGGCGTCATC GCGCAGCCGC
CTGGTGGCGG CGGTCGTGCC CACCCTCAAC GGCCCGGTGT TCCTGGAAAC CGTGCAAGCC
CTGACGGATG CCCTGGCCGA ACAGGGCTAC CAGTTGATGC TGGGCCAGAG CGGCTATGTG
GATTCACGCG AGGATGCCCT GCTGGAAGCC ATCATTGGCC GCCGGCCGGA CGGCATTGTG
CTGACCGGCA TCATGCATTC CCCCGAGGGA CGCAAGCGCC TGCTGGCGGC CGGCATACCG
GTTGTCGAAA CCTGGGACCT CACGCCCACC CCGCTGGACA TGCTGGTCGG CTTTTCCCAT
GTGGATGTCG GGCGCGCGGT GGTCGATTTT CTCTATGCCA GGGGACGACG CCGCCTGGCG
ATCGTGGCGG GCGACGACGA GCGTTCGACA CGCCGCCACC AGGCTTTCCA GGCCGCGGCG
CGGGCCGCGG GCCTGCCCGA AGTCCGGATG GTGACCGTGC CCGCGCCGAC CACCGCGAAA
AGCGGCCGCA GCGCGCTGGC CGAACTGATG CGGGACGCGG GTGATATCGA TGCCGTGTTT
TGCAGTTCGG ACCTGCTGGC GCTGGGCGTT CTGATGCAAG CCCAGGCCAG CGGCATTGCG
GTGCCCGGGC AACTGGCCAT CGTGGGCTTC GGCGACCTGG AGTTTGCCGC CGACCTGAAC
CCCGCGCTGA CAACAGTGCG CATCGATGGC ACGGCCATCG GCCGGCAGGC CGCCCGGTTC
ATCGTGGAGC GTGCGGAAGG CCGGCCGGTG GAGCCACGGG TCGTCGACAT CGGCTTCACG
ATTGTCGAAC GGGGCAGCAC CTGA
|
|---|
| Protein sequence | MNHEDTPTDT QTRRTRRGSG AVTLHDVAKL AGVAPITASR ALNTPTQVSA EVLKKVTDAV
QRTGYVPNRL AGGLASSRSR LVAAVVPTLN GPVFLETVQA LTDALAEQGY QLMLGQSGYV
DSREDALLEA IIGRRPDGIV LTGIMHSPEG RKRLLAAGIP VVETWDLTPT PLDMLVGFSH
VDVGRAVVDF LYARGRRRLA IVAGDDERST RRHQAFQAAA RAAGLPEVRM VTVPAPTTAK
SGRSALAELM RDAGDIDAVF CSSDLLALGV LMQAQASGIA VPGQLAIVGF GDLEFAADLN
PALTTVRIDG TAIGRQAARF IVERAEGRPV EPRVVDIGFT IVERGST
|
|---|
| |