| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3350 |
|---|
| Symbol | |
|---|
| ID | 4013964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3546131 |
|---|
| End bp | 3547969 |
|---|
| Gene Length | 1839 bp |
|---|
| Protein Length | 612 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637943014 |
|---|
| Product | glutaminyl-tRNA synthetase |
|---|
| Protein accession | YP_550158 |
|---|
| Protein GI | 91789206 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0008] Glutamyl- and glutaminyl-tRNA synthetases |
|---|
| TIGRFAM ID | [TIGR00440] glutaminyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.446012 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCTCCC CCGCCCCCTC CAAAGCTGGC CCCAAGGGCA CTGCTGCCGC AGCCCCCGCC
GACAAAGAAA ACCACAAGCC CAGCAACTTT TTGCGCCAGA TCATCGAAAA AGACCTGGCT
GAAGGCACGT ATGCCACCCG CCGCTGGGGC GGCAGCCCTG GCGATGCCGC CCACCACGCC
AGCGGCCAGC CCGACCCGGC CCGGGTGCGC CTGCGCTTTC CGCCCGAGCC CAACGGCTAC
CTGCACATCG GCCACGCCAA GAGCATTTAC CTGAACTTTG GCCTGGCGCG CGACTACGGC
GGCGTGTGCC ACCTGCGCTT TGACGACACC AACCCCGAAA AAGAAGACAC CGAATACGTC
AGCAGCATCA TTGAAGCGGT GAAGTGGCTG GGTTTTGACT GGGAAAACAA CGGCCCATCC
GGCAACGAGT GCAACCTCTA TCAGGCCAGC GACTATTTCG ACTTCATGTA CCGCGCCGCC
GAATACCTGA TCGAATCCGG CAACGCCTAT GTAGACGAGC AAACCGCCGA GGAAATGCGC
CTCAGCCGCG GCGACTTCGG CCACCCCGGC ACCAACAGCC CCTTTCGCAG CCGCACGCCA
GAGCAAAACC TGGCGCGCTT TCGCGAAATG CGTGACGGCC TGCATGAAGA CGGCTCCATG
GTGCTGCGCG CCAAGATCGA CATGGCCAGC CCCAACATCA ATATGCGCGA CCCGGCCATT
TACCGCATTC GCCGCGCCCA CCACCACAAC ACCGGCGACA AATGGTGCAT CTACCCCATG
TACACCTTTG CGCACCCCAT CGAGGACGCA CTGGAGCAGA TCACCCACAG CATCTGCACG
CTGGAGTTTG AAGACCAGCG CCCGTTTTAC GACTGGCTGC TCGACCGCCT GTGCGAAGGC
GGCCTGGTTG CCACGCCGCA CCCGCACCAG TACGAATTTG CCCGCCTCAA CCTCACCTAT
GTGCTGACCA GCAAACGCAA GCTGGCGCAA CTGGTGTACG ACCACAAGGT CACCGGCTGG
GACGACCCCC GCATGCCAAC CATCGTCGGC CTGCGCCGCC GCGGCTACAC CCCCGAAGCG
CTGCACCTGT TCGCCGAACG CATTGGCGTG ACCAAGAGCG ACAGCTGGAT TGACTACAGC
ACGCTGGAAG GCGCACTGCG CGACACACTG GACCCCATCG CCCCCCGCGC CATGGCCGTG
CTCGACCCCG TCAAGTTGGT GCTGACCAAT TGGGACACGG TCATGGGCGC AGGCAAGCTC
GACGACTGCA GCGCCCCCGT GCACCCGCAC CACCCCGAGC TGGGCAAGCG CAGTTTCAAA
ATCGGCAAAG AAGTGTGGAT TGAACGCACC GACTTTGAAG AGACACCCCC CAAAGGCTTC
TTCCGCCTGT TCCCGGGCAA CAAGGTGCGC CTCAAATACG GCCACGTCAT CGAATGCACA
GGAGCTACCC GCGACGCCAA CGGCCAGGTC ACCGAAGTAC AGGCCACGCT GATCCCCGAC
ACCAAGAGCG GCACCCCCGG CTCGGACGCC ATCAAGGTCA AGGGCGTGAT CACCTGGGTA
GGCGTGAATG ATGCGGTGCA GGCCGAAGTG CGCCTCTATG ACCGCCTCTT CAAGGAAGCC
CACCCCGGTA CGGGCGAGAA GGACTTTATG GAAGAGCTGA ATCCGGACAG CCTGAAGGTG
GTGACGGCGT ATGTGGAGCC TTCATTGGCC AGCGCGCCTG CTGGCCAGCG CTTCCAGTTT
GAGCGGCATG GGTACTTTGT CACAGACATT GTTGACCACA AGCCGGGGAA AACCGTGTTC
AATCGGGTGA CGGGGATGAA AGATAGCTGG GGAAAGTAG
|
|---|
| Protein sequence | MTSPAPSKAG PKGTAAAAPA DKENHKPSNF LRQIIEKDLA EGTYATRRWG GSPGDAAHHA
SGQPDPARVR LRFPPEPNGY LHIGHAKSIY LNFGLARDYG GVCHLRFDDT NPEKEDTEYV
SSIIEAVKWL GFDWENNGPS GNECNLYQAS DYFDFMYRAA EYLIESGNAY VDEQTAEEMR
LSRGDFGHPG TNSPFRSRTP EQNLARFREM RDGLHEDGSM VLRAKIDMAS PNINMRDPAI
YRIRRAHHHN TGDKWCIYPM YTFAHPIEDA LEQITHSICT LEFEDQRPFY DWLLDRLCEG
GLVATPHPHQ YEFARLNLTY VLTSKRKLAQ LVYDHKVTGW DDPRMPTIVG LRRRGYTPEA
LHLFAERIGV TKSDSWIDYS TLEGALRDTL DPIAPRAMAV LDPVKLVLTN WDTVMGAGKL
DDCSAPVHPH HPELGKRSFK IGKEVWIERT DFEETPPKGF FRLFPGNKVR LKYGHVIECT
GATRDANGQV TEVQATLIPD TKSGTPGSDA IKVKGVITWV GVNDAVQAEV RLYDRLFKEA
HPGTGEKDFM EELNPDSLKV VTAYVEPSLA SAPAGQRFQF ERHGYFVTDI VDHKPGKTVF
NRVTGMKDSW GK
|
|---|
| |