Gene Bpro_3332 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3332 
Symbol 
ID4013985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3526508 
End bp3527215 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content58% 
IMG OID637942996 
ProductABC transporter related 
Protein accessionYP_550140 
Protein GI91789188 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.803262 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAC TCAGTGTCAA GAATCTTACT ACCGGCTTTG ACAAGGTCAA TGTCCTGCAT 
GATGTGTCGA TCGAGGTGGA GCCGGGCAAG ATCACCTGCA TTTTGGGCTC AAACGGGGCA
GGAAAGAGTA CGCTGATCCG TTCGATTCTC GGTCTGACGC CTCCGCGTCA GGGTGAAATC
TGGTGGGATG GGCGCAACCT TGCCGGGGAG AAAACGCACA AAATCATCGC CAGCGGCATC
GCCTGCATTC CGGAAGGCCG CAAAGTCTTT CCGCGCATGA CGGTCGGGGA AAACCTGGCA
CTTGGCGCTT TTCTGGAGTC ATCCCCTACT CGGATTGGGG AGCGACTGGC GCGGGTTTAC
GAGATATTCC CCCGTCTGAA GGAGCGGTCG GCGCAGCTTG CCGGGACCAT GTCGGGCGGC
GAGCAGGCCA TGGTGTCGAT CGGTCGCGGC CTGATGGCTG AACCCAAGCT GCTGCTGATT
GATGAGCCTT CGCTTGGTTT GTCGCCTTTG TATGTGAAAG AAAACTTCAA GGTGATCAAG
CAGATCAATG ATCTCGGGGT CACGGTTCTG CTGGTGGAGC AGAACGCCCG TCAGACGCTG
GCGATCGCGC ACTACGGATA TGTTCTTTCG CAGGGCAAGG TCGTCGCCTC CGGTTCGGCA
CAAGCGCTGT CCGAGAACGA CGAAGTGCGT TCCGCATATT TCGGCTGA
 
Protein sequence
MSKLSVKNLT TGFDKVNVLH DVSIEVEPGK ITCILGSNGA GKSTLIRSIL GLTPPRQGEI 
WWDGRNLAGE KTHKIIASGI ACIPEGRKVF PRMTVGENLA LGAFLESSPT RIGERLARVY
EIFPRLKERS AQLAGTMSGG EQAMVSIGRG LMAEPKLLLI DEPSLGLSPL YVKENFKVIK
QINDLGVTVL LVEQNARQTL AIAHYGYVLS QGKVVASGSA QALSENDEVR SAYFG