| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3308 |
|---|
| Symbol | |
|---|
| ID | 4014039 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3504359 |
|---|
| End bp | 3505129 |
|---|
| Gene Length | 771 bp |
|---|
| Protein Length | 256 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637942973 |
|---|
| Product | demethylmenaquinone methyltransferase |
|---|
| Protein accession | YP_550117 |
|---|
| Protein GI | 91789165 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
|---|
| TIGRFAM ID | [TIGR01934] ubiquinone/menaquinone biosynthesis methyltransferases |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.717606 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACTT CCGAACCCGT CCCTACGACG CATGCACCCC ATATTCCGCT CACTGATTAC
TACCAGACAG AGCAGGATAG ACAAGCCTAT TTGCGCAAGA TTTTTGACAA TACCGCTGCG
GATTACGACC GTATCGAGGC GATGTTGGCA TGGGGCACTG GTTCCCGTTA CCGGCACCAG
GCCCTGATCC GGGGCGGTTT GCAAGCGGGC ATGAAAGTGC TCGATGTGGG TGTGGGAACC
GGCCTGGTTG CGGCGCAGGC CTGCCTCCTG GCCGGCGATC CCGCCTTGGT CACCGGGGTT
GATCCCAGCC CCGGCATGAT GGCGGCCAGC AAGCTGCCCA AGACCATGGT GCTGATGGAG
GGCCGGGCCG AATCATTGCC TTTTCCGGAC AACCACTTTG ATTTCCTGAG CATGGGCTAT
GCACTTCGCC ACATCAGTGA CCTGGGTGTG GCGTTTGCAG AGTTTCAACG GGTATTGAAG
CCCGGTGGCC GTCTGTGCAT CCTTGAAATA ACCCAGGCGA AAAGCGGCTT GGGGCAGTGG
CTGCTCAAAA CTTACATGCG GGGTGTGATA CCGCTGCTGA CGCGGTTTAT TTCCCGGGAA
AAAGATACAG CAACGATCTG GCGTTACTAC TGGGACAGCA TAGAAGCCTG CGTCCCTCCC
GAACAAGTCA TGGCCACACT GAGGGCGGCC GGGCTGACGC AGGTCAAGCA ACACCTGGAG
GTTGGCGTGT TTTCGGAATA CCAGGCGATC AAACCCGGGA ACGCCAGTTG A
|
|---|
| Protein sequence | MKTSEPVPTT HAPHIPLTDY YQTEQDRQAY LRKIFDNTAA DYDRIEAMLA WGTGSRYRHQ
ALIRGGLQAG MKVLDVGVGT GLVAAQACLL AGDPALVTGV DPSPGMMAAS KLPKTMVLME
GRAESLPFPD NHFDFLSMGY ALRHISDLGV AFAEFQRVLK PGGRLCILEI TQAKSGLGQW
LLKTYMRGVI PLLTRFISRE KDTATIWRYY WDSIEACVPP EQVMATLRAA GLTQVKQHLE
VGVFSEYQAI KPGNAS
|
|---|
| |