| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3292 |
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| Symbol | |
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| ID | 4014024 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3487861 |
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| End bp | 3488667 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637942960 |
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| Product | RNA methyltransferase TrmH, group 1 |
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| Protein accession | YP_550104 |
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| Protein GI | 91789152 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.911818 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.434355 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC GTTTTGTCCT GATCAACACC AGCCACGCCG GCAATGTGGG CGCTGCCGCG
CGCGCCATGA AGGTCATGGG CTTTGACGAC CTGGTGCTGG TGGCGCCGCG CTGGGCGAAC
GTGCTGAACC GTGAAGAAAC CATCCAGCGG GCCAGCGGCG CGCTCGACGT CCTGAAAAAC
GCCCGTATCG TGGCCACGCT GGATGAGGCG CTCGATGGCA TGTCGCACCT GTGCGCCACC
GCCATGACGC CGCGCGACTT TGGCCCGCCA ACCCGCGCGC CGCGCGAGCA CTTCAGCAAA
TTGCTATCAA ACGATGAGCC CTCGTCGCCC GAAAATAAAG GGCTGCAGCC CGATTCGGTG
GCCTTCCTGT TTGGTTCCGA ACGGTTTGGC ATGCAAAACG ACGATGTGTA CCGCTGCCAT
GTGGCCTTGA GCATTCCAAC CGACCCGAAG TTTGGCTCGC TCAACCTCGG GGCCGCGGTG
CAGCTGATTG CCTATGACTG GCGCCAGGCG CTGGGCGGTT TTGCCGTGCA GCCGGCTACA
CCCGAGCCCA AACTGGCGGA CGCCGCCGAG GTGGCCGGCA TGCTCGGCCA CTGGGAAGAA
GCGCTCACCG ACATTGGTTT TCTGGACCCG GCCTCACCGA AAAAACTGAT GCCGCGACTG
AACCAGCTTT TCAACCGGGC GCAGCTCAGC CCTGAAGAGA TCCACATCCT GCGCGGTGTG
GCCAAGGCCA TGTCGAGGAC GGCGAATAAA GCCGTGCCGT CCGCGGTCAA AACGCCTGCG
CCAGCAGACA CGCTGGACCC CCAGTAG
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| Protein sequence | MKTRFVLINT SHAGNVGAAA RAMKVMGFDD LVLVAPRWAN VLNREETIQR ASGALDVLKN
ARIVATLDEA LDGMSHLCAT AMTPRDFGPP TRAPREHFSK LLSNDEPSSP ENKGLQPDSV
AFLFGSERFG MQNDDVYRCH VALSIPTDPK FGSLNLGAAV QLIAYDWRQA LGGFAVQPAT
PEPKLADAAE VAGMLGHWEE ALTDIGFLDP ASPKKLMPRL NQLFNRAQLS PEEIHILRGV
AKAMSRTANK AVPSAVKTPA PADTLDPQ
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