Gene Bpro_3278 details

Gene Information

• Locus tag: Bpro_3278
• ID: 4014049
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas sp. JS666
• Kingdom: Bacteria
• Replicon accession: NC_007948
• Strand: +
• Start bp: 3472802
• End bp: 3473188
• Gene Length: 387 bp
• Protein Length: 128 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 637942946
• Product: assimilatory nitrite reductase (NAD(P)H) small subunit
• Protein accession: YP_550090
• Protein GI: 91789138
• COG category: [P] Inorganic ion transport and metabolism; [R] General function prediction only
• COG ID: [COG2146] Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases
• TIGRFAM ID: [TIGR02378] nitrite reductase [NAD(P)H], small subunit

Plasmid Coverage information

• Num covering plasmid clones: 23
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 19
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGTGAAT GGAAAAAAAT CTGTCTGGTC AATGACATCC CGGTGCTGGG CTCGCGTCGC 
GTGGCGCGTG CAAAAGGCAT GGATGTGGCC GTGTTTCGCA ATGACGAAGA CGTCGTGTTC 
GCCCTGCTGG ACCGTTGCCC GCACAAGGGC GGCCCGTTGA GCCAGGGCAT CGTGTTCGGC 
ACCAGCGTGG CCTGCCCGCT GCACAACTGG ACGATCGGCC TGGCCGACGG CTGCGCCAGG 
GCACCGGATG TCGGCTGCAC CCAGAAATTC AGCGTCCATG TCGCGGATGG TGTGGTGCAC 
CTGGACGCCA CCGAACTGGC AACATTGGCC CTGGAGCAGC AGGCCGTCGT GGCCGGTCCC 
GCCAGCAAAG TGCTTGCCGG CGCATGA 

 

Protein sequence

MSEWKKICLV NDIPVLGSRR VARAKGMDVA VFRNDEDVVF ALLDRCPHKG GPLSQGIVFG 
TSVACPLHNW TIGLADGCAR APDVGCTQKF SVHVADGVVH LDATELATLA LEQQAVVAGP 
ASKVLAGA