| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3274 |
|---|
| Symbol | |
|---|
| ID | 4014045 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3465939 |
|---|
| End bp | 3467723 |
|---|
| Gene Length | 1785 bp |
|---|
| Protein Length | 594 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637942942 |
|---|
| Product | protein serine/threonine phosphatases |
|---|
| Protein accession | YP_550086 |
|---|
| Protein GI | 91789134 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase
[COG0631] Serine/threonine protein phosphatase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.35703 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCATTTG ACCTGGACAT TGGCTTCGCA ACGCTTGCGG GCCGCAAAGA CAGCAACGAG
GACTTCTGCG CGGCCATGCT GCCGGAGCCC GGCCGGGAGG GCATGGGGTC CATCGTCGCG
ATTGCCGACG GTGTGAGCAC CGGCGGCATG GGTAAGGAGG CGGCACAAAC CACCGTCACC
AGCCTGGTAC GCGATTACTA CGGTACGCCT GAAACCTGGG AAACCACGGT GGCGTTGGAC
CGGATCATTG GCGCGCAGAA CGCCTGGCTG GCGGGTCTGA ACCGGCGCAG GCATCCGGCG
ATCGGCCTGA CCACCCTGAC GGCAGTGGTG TTGCGGGGGC AGTCGTATTC ACTGGCCCAT
GTCGGCGACA CCCGCGCGTA CCTGCTGCGT GCCGGGCATC TGATGCAGCT CACCAGCGAC
CATGTGGTCG ATCACCCGGA TTTCCGGCAT CAGCTGCTGC GCTGCGTGGG CGCGGAAGAC
CGCCTGGTGG TGGACTACTC CCAGGGTGAC CTGCAGGTGG GCGATATTTT CGTGCTGCTG
TCGGATGGGG TGCACAACGT ACTGTCGGGC AAGCGGCTCG ATGCTCTGGT CCTGCCCGCC
AGTATTCCCG GGCGTGCCGG AGACACCGGG GTTGACGCGA AAACCCTCAG CCAGCGGCTG
GTCGATGCCG CGATGGCCGC AGGCACGACG GATAACGTCA CCGCCCTGGT GGTGCGCGTG
CTGGGCTTGC TCGATGCGAA CCTGCAGGAT GAAAACCGCC AGGCGCTGGC CTTGCCGGTG
CCGCGGCGGC TCAAGGTCGG CAGCCTGCTG GATGGCCTGT CCGTGACCGC CGTCGTTGCA
GACAACGGCG TCAACTTGCT CTATCAGGTA CGGGATGTCG CGAGCCAGAA ACTCTATGCG
ATCAAGACGC TGCACCCCGC ACGGGCGCAG GATCCCGAGG AGCGCGCCAT GCTGGCCCAC
GAAGCCTGGC TGGCCAAGCG CATGCAGTCG TCCCGCGCGG CCGACCATCT GGTCAACCTG
CATGACCATC CGCCGGGCGT CGAGGTAGCC AGCGCTTTTT ACCTGCTCTA CGACTGGCAT
GCCGGTGAAA CACTTCAGCA GCAACTCGAC CGCAAGCATG CCTTCAACCT GCCACAGGTC
CTGACGGTGG CCACCCAGGC TGCGAAAGCC TTGGGCCGCC TGCACCGCCA GAGCGTGATC
CACCGTGACA TCAAGCCCGC CAACCTGCAC CAGGGTGAGG ACGGCATTCT TCGGGTGCTT
GATCTGGGGG TTGCCCTGAC GGGCCGCGAG CCCGAGGCCA TGCGCCAGCT GCATGCAGGC
ACACCCAGCT ACATCAATCC CGAGCAATGG GGCTTTGGGG TCAAGCCCGG CGGCGCTGGC
GGCGACATCG CGCAAGAGCT GCCCGATGCG CAAAGCGACC TGTTCGCGCT CGGCGTGACG
CTGTACCAGC TGCTGACCGG CAAGCTGCCG TACGGTGAGG TGCTGCCCTA CCAGGCAGGG
CGCTATTACC ACGACCCGAT CCCGCCAAGC CGCCACAACC CCGAGGTGCC GATCTGGCTG
GATCATGTCG TGTTGAAGGC CGTGGCGCGC GACAAGCGCC AGCGATTTGA AACGGCCGAG
GAACTGCTGC TGGCGCTGGA GCGGGGCGCC TCACGGCCGC TAACGGCGCC GCCGGCTACG
CCTTTGATCC AGCGCGATCC CGCGGCCTTA TGGAAGTTGG CGTTGGGGGT CAGTGTGCTA
TTCAATCTTT TGCTGGTTTA CTGGTTGCTG TTTTTGCCAA GGTAG
|
|---|
| Protein sequence | MAFDLDIGFA TLAGRKDSNE DFCAAMLPEP GREGMGSIVA IADGVSTGGM GKEAAQTTVT
SLVRDYYGTP ETWETTVALD RIIGAQNAWL AGLNRRRHPA IGLTTLTAVV LRGQSYSLAH
VGDTRAYLLR AGHLMQLTSD HVVDHPDFRH QLLRCVGAED RLVVDYSQGD LQVGDIFVLL
SDGVHNVLSG KRLDALVLPA SIPGRAGDTG VDAKTLSQRL VDAAMAAGTT DNVTALVVRV
LGLLDANLQD ENRQALALPV PRRLKVGSLL DGLSVTAVVA DNGVNLLYQV RDVASQKLYA
IKTLHPARAQ DPEERAMLAH EAWLAKRMQS SRAADHLVNL HDHPPGVEVA SAFYLLYDWH
AGETLQQQLD RKHAFNLPQV LTVATQAAKA LGRLHRQSVI HRDIKPANLH QGEDGILRVL
DLGVALTGRE PEAMRQLHAG TPSYINPEQW GFGVKPGGAG GDIAQELPDA QSDLFALGVT
LYQLLTGKLP YGEVLPYQAG RYYHDPIPPS RHNPEVPIWL DHVVLKAVAR DKRQRFETAE
ELLLALERGA SRPLTAPPAT PLIQRDPAAL WKLALGVSVL FNLLLVYWLL FLPR
|
|---|
| |