Gene Bpro_3247 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3247 
Symbol 
ID4014093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3437726 
End bp3438379 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content57% 
IMG OID637942914 
ProductNADH-ubiquinone/plastoquinone oxidoreductase, chain 6 
Protein accessionYP_550059 
Protein GI91789107 
COG category[C] Energy production and conversion 
COG ID[COG0839] NADH:ubiquinone oxidoreductase subunit 6 (chain J) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.968108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.951896 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGCTA AAACAGGTCT CTTTTATGTT TTTGCCGCGG TGCTGCTGTT CGCGGCATTT 
CGGGTGATTA CCGCGCGTAA CCCGGTGCAT GCGGCGCTGT ATCTGGTGCT GGCATTTTTC
CAGGCGGCCG CCGTCTGGAT TTTGCTCAAA GCCGAGTTTC TGGCCATCAC GCTGGTGCTT
GTCTATGTGG GCGCGGTGAT GGTGCTCTTC CTGTTCGTGG TCATGATGCT GGACATCAAC
ATTGACAGCG TGCGCAAGGG TTTCTGGAAG CATTTTCCGC TGGCCGGCAC AGTCGGCGCC
ATCATCGCGC TGGAGATGTC TTATGTGCTG ATGGGCGGAT TCCGCGAGCC TCCCAAAGCA
GCTTCCGCGC CGGGCCAGAT AGGTGCCCAG GTGTCGAACA CCAAAGAACT GGGCAAGCTC
CTGTACTCTG AATACCTTTA TCCGCTGGAA GTCGCCGCGG TGATTCTGCT GGTGGCCATG
ATCGCCGCCA TCGCCCTGAC CTTGCGTCAA CGCAAGGACA CCAAATACAT CAATCCTTCC
GACCAGATCC GGGTCAAACG GGGAGACCGG GTCAGCCTGG TCAAGATGAA GTCTGTGGTC
GCCGCACCTG CTACCCTGGG TACGACAGCT CCCGTCGAGG AAAAACAATC ATGA
 
Protein sequence
MDAKTGLFYV FAAVLLFAAF RVITARNPVH AALYLVLAFF QAAAVWILLK AEFLAITLVL 
VYVGAVMVLF LFVVMMLDIN IDSVRKGFWK HFPLAGTVGA IIALEMSYVL MGGFREPPKA
ASAPGQIGAQ VSNTKELGKL LYSEYLYPLE VAAVILLVAM IAAIALTLRQ RKDTKYINPS
DQIRVKRGDR VSLVKMKSVV AAPATLGTTA PVEEKQS