Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3245 |
Symbol | |
ID | 4014091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3435197 |
End bp | 3437233 |
Gene Length | 2037 bp |
Protein Length | 678 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637942912 |
Product | proton-translocating NADH-quinone oxidoreductase, chain L |
Protein accession | YP_550057 |
Protein GI | 91789105 |
COG category | [C] Energy production and conversion [P] Inorganic ion transport and metabolism |
COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.211408 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.708243 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGCAA CCCTTTCTGC ATCAACATTG CTGGCCGTTC CGCTGGCACC TCTGGCTGGC GCCATGCTGG CTGGTATTCT GGGTACTTCC TTTGGTGGCA ACTGGATAGG CCGCCGGCTG TCCCATAGCC TCACCATCCT CGGCGTGCTG GTAGCCTTCA TCATTTCTGC CATGACGCTC AAGAGCGTGG TTCTCGAGGG TGCGCGCTTC AATGAAACGC TCTACACCTG GATGGTGGTG GGCGGCCTGA AAATGGAAGT CGGCTTTCTT GTCGATGGCC TGACGGCCAT GATGATGTGC GTGGTGACTT TTGTCTCGCT GATGGTGCAT ATCTACACGA TTGGCTATAT GGAAGAAGAC GACGGTTACA ACCGCTTCTT TGCCTATATT TCGCTCTTCA CTTTCTCCAT GCTGATGCTG GTGATGAGCA ACAACATGCT GCAGCTGTTC TTTGGCTGGG AAGCGGTGGG CCTGGTGTCC TACCTGCTGA TCGGCTTCTG GTTCAACAAG CCGAGCGCCA TTTTTGCCAA CATGAAGGCC TTCATCGTCA ACCGTGTGGG GGACTTCGGC TTCATCCTGG GTATTGGCCT CATTGCAGCC TACGCCGGTA CGCTCAACTA TGCCGAAGCG TTTGCCAAGG CGGATGAGCT GTCCAAACTG GCGTTCCCGG GGACCGGCTG GATGCTGATT ACCGTGATCT GCATCTGCCT CTTTATTGGC GCCATGGGCA AGTCGGCCCA GTTCCCGCTG CATGTGTGGT TGCCCGACTC CATGGAAGGC CCGACCCCGA TTTCCGCGTT GATTCACGCC GCGACCATGG TGACTGCCGG CATCTTCATG GTGGCACGCA TGTCACCGCT GTTTGAACTC AGCGATACCG CCCTCAGCTT CATCATGGTG ATCGGGGCGA TCACGGCCCT GTTCATGGGC TTCCTCGGCA TCATCCAGAA CGACATCAAG CGCGTGGTGG CTTATTCCAC CTTGTCGCAG CTCGGCTACA TGACGGTGGC CCTGGGTGCT TCCGCCTACT CCGTGGCCGT GTTCCACCTG ATGACGCACG CGTTCTTCAA GGCACTACTG TTCCTGGCTG CCGGCTCGGT GATCATCGGC ATGCATCACA ACCAGGATAT CCGCTGGATG GGGGGCGTGC GCAAGTACAT GCCCATCACC TGGATCACCT CGCTGCTCGG ATCGCTTGCA CTGATCGGTA CGCCGCTGTT CGCAGGTTTT TACTCCAAGG ACAGCATCAT TGAAGCGGTG CATGAGAGCC ACCTGGCGGG TGCCGGTTTC GCGCATTTCG CGGTGCTGGC CGGTGTGTTT GTCACGGCGT TCTATTCCTT CCGCATGTAC TTCCTGGTAT TCCACGGCAA GGAGCGTTTT GACCAGAACC CCGATGGACA CCACCATGAC GCCAGCGAGG AACCGGATCC GCACCACCAT CGCGAAGAAC ATCAGGCTCC GCACGAGTCA CCGTGGGTGG TCACCGTCCC ACTGATCCTG CTGGCCATTC CGTCTGTGGT CATCGGCTTC ATGACGATTC AGCCCATGCT GTTTGGTGAA TTCTTTAAGG ATGCGATTTT CTTCAATGCC GAGAAACATC CCGCGATGGC CGAGTTGGCC AAGGCCTTCC ACGGCCCGGC GCAAATGGCC TTGCACGGCC TGATGACAGC ACCGTTCTGG CTGGCGCTGG CGGGCGTGGT GCTGGCGTAT TACATGTACC TGGTCAACCC CGCGCTGCCT GCGCGCATCA AGCGCGCGGT GCAACCCCTC TACACGTTGC TCGAGAACAA ATACTACTTC GACTGGTTCA ACGAGAACGT GCTGGCCCGC GCAACGCGTG CGATGGGTAC CGGTCTGTGG AAGGGCGGCG ACGAGGCACT GATCGATGGT GCGCTGGTCA ACGGCTCCTG GAAACTGGTG GGCTGGGTGT CCAGCGTGGT GCGAAGGCTG CAGTCGGGTT ACATCTACCA CTACGCTTTT GGCATGATCA TCGGCGTCTT TTTATTGATG ACGTATTTCG TTTGGCTGAA CCAATAA
|
Protein sequence | MSATLSASTL LAVPLAPLAG AMLAGILGTS FGGNWIGRRL SHSLTILGVL VAFIISAMTL KSVVLEGARF NETLYTWMVV GGLKMEVGFL VDGLTAMMMC VVTFVSLMVH IYTIGYMEED DGYNRFFAYI SLFTFSMLML VMSNNMLQLF FGWEAVGLVS YLLIGFWFNK PSAIFANMKA FIVNRVGDFG FILGIGLIAA YAGTLNYAEA FAKADELSKL AFPGTGWMLI TVICICLFIG AMGKSAQFPL HVWLPDSMEG PTPISALIHA ATMVTAGIFM VARMSPLFEL SDTALSFIMV IGAITALFMG FLGIIQNDIK RVVAYSTLSQ LGYMTVALGA SAYSVAVFHL MTHAFFKALL FLAAGSVIIG MHHNQDIRWM GGVRKYMPIT WITSLLGSLA LIGTPLFAGF YSKDSIIEAV HESHLAGAGF AHFAVLAGVF VTAFYSFRMY FLVFHGKERF DQNPDGHHHD ASEEPDPHHH REEHQAPHES PWVVTVPLIL LAIPSVVIGF MTIQPMLFGE FFKDAIFFNA EKHPAMAELA KAFHGPAQMA LHGLMTAPFW LALAGVVLAY YMYLVNPALP ARIKRAVQPL YTLLENKYYF DWFNENVLAR ATRAMGTGLW KGGDEALIDG ALVNGSWKLV GWVSSVVRRL QSGYIYHYAF GMIIGVFLLM TYFVWLNQ
|
| |