Gene Bpro_3245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3245 
Symbol 
ID4014091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3435197 
End bp3437233 
Gene Length2037 bp 
Protein Length678 aa 
Translation table11 
GC content58% 
IMG OID637942912 
Productproton-translocating NADH-quinone oxidoreductase, chain L 
Protein accessionYP_550057 
Protein GI91789105 
COG category[C] Energy production and conversion
[P] Inorganic ion transport and metabolism 
COG ID[COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit 
TIGRFAM ID[TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.211408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.708243 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAA CCCTTTCTGC ATCAACATTG CTGGCCGTTC CGCTGGCACC TCTGGCTGGC 
GCCATGCTGG CTGGTATTCT GGGTACTTCC TTTGGTGGCA ACTGGATAGG CCGCCGGCTG
TCCCATAGCC TCACCATCCT CGGCGTGCTG GTAGCCTTCA TCATTTCTGC CATGACGCTC
AAGAGCGTGG TTCTCGAGGG TGCGCGCTTC AATGAAACGC TCTACACCTG GATGGTGGTG
GGCGGCCTGA AAATGGAAGT CGGCTTTCTT GTCGATGGCC TGACGGCCAT GATGATGTGC
GTGGTGACTT TTGTCTCGCT GATGGTGCAT ATCTACACGA TTGGCTATAT GGAAGAAGAC
GACGGTTACA ACCGCTTCTT TGCCTATATT TCGCTCTTCA CTTTCTCCAT GCTGATGCTG
GTGATGAGCA ACAACATGCT GCAGCTGTTC TTTGGCTGGG AAGCGGTGGG CCTGGTGTCC
TACCTGCTGA TCGGCTTCTG GTTCAACAAG CCGAGCGCCA TTTTTGCCAA CATGAAGGCC
TTCATCGTCA ACCGTGTGGG GGACTTCGGC TTCATCCTGG GTATTGGCCT CATTGCAGCC
TACGCCGGTA CGCTCAACTA TGCCGAAGCG TTTGCCAAGG CGGATGAGCT GTCCAAACTG
GCGTTCCCGG GGACCGGCTG GATGCTGATT ACCGTGATCT GCATCTGCCT CTTTATTGGC
GCCATGGGCA AGTCGGCCCA GTTCCCGCTG CATGTGTGGT TGCCCGACTC CATGGAAGGC
CCGACCCCGA TTTCCGCGTT GATTCACGCC GCGACCATGG TGACTGCCGG CATCTTCATG
GTGGCACGCA TGTCACCGCT GTTTGAACTC AGCGATACCG CCCTCAGCTT CATCATGGTG
ATCGGGGCGA TCACGGCCCT GTTCATGGGC TTCCTCGGCA TCATCCAGAA CGACATCAAG
CGCGTGGTGG CTTATTCCAC CTTGTCGCAG CTCGGCTACA TGACGGTGGC CCTGGGTGCT
TCCGCCTACT CCGTGGCCGT GTTCCACCTG ATGACGCACG CGTTCTTCAA GGCACTACTG
TTCCTGGCTG CCGGCTCGGT GATCATCGGC ATGCATCACA ACCAGGATAT CCGCTGGATG
GGGGGCGTGC GCAAGTACAT GCCCATCACC TGGATCACCT CGCTGCTCGG ATCGCTTGCA
CTGATCGGTA CGCCGCTGTT CGCAGGTTTT TACTCCAAGG ACAGCATCAT TGAAGCGGTG
CATGAGAGCC ACCTGGCGGG TGCCGGTTTC GCGCATTTCG CGGTGCTGGC CGGTGTGTTT
GTCACGGCGT TCTATTCCTT CCGCATGTAC TTCCTGGTAT TCCACGGCAA GGAGCGTTTT
GACCAGAACC CCGATGGACA CCACCATGAC GCCAGCGAGG AACCGGATCC GCACCACCAT
CGCGAAGAAC ATCAGGCTCC GCACGAGTCA CCGTGGGTGG TCACCGTCCC ACTGATCCTG
CTGGCCATTC CGTCTGTGGT CATCGGCTTC ATGACGATTC AGCCCATGCT GTTTGGTGAA
TTCTTTAAGG ATGCGATTTT CTTCAATGCC GAGAAACATC CCGCGATGGC CGAGTTGGCC
AAGGCCTTCC ACGGCCCGGC GCAAATGGCC TTGCACGGCC TGATGACAGC ACCGTTCTGG
CTGGCGCTGG CGGGCGTGGT GCTGGCGTAT TACATGTACC TGGTCAACCC CGCGCTGCCT
GCGCGCATCA AGCGCGCGGT GCAACCCCTC TACACGTTGC TCGAGAACAA ATACTACTTC
GACTGGTTCA ACGAGAACGT GCTGGCCCGC GCAACGCGTG CGATGGGTAC CGGTCTGTGG
AAGGGCGGCG ACGAGGCACT GATCGATGGT GCGCTGGTCA ACGGCTCCTG GAAACTGGTG
GGCTGGGTGT CCAGCGTGGT GCGAAGGCTG CAGTCGGGTT ACATCTACCA CTACGCTTTT
GGCATGATCA TCGGCGTCTT TTTATTGATG ACGTATTTCG TTTGGCTGAA CCAATAA
 
Protein sequence
MSATLSASTL LAVPLAPLAG AMLAGILGTS FGGNWIGRRL SHSLTILGVL VAFIISAMTL 
KSVVLEGARF NETLYTWMVV GGLKMEVGFL VDGLTAMMMC VVTFVSLMVH IYTIGYMEED
DGYNRFFAYI SLFTFSMLML VMSNNMLQLF FGWEAVGLVS YLLIGFWFNK PSAIFANMKA
FIVNRVGDFG FILGIGLIAA YAGTLNYAEA FAKADELSKL AFPGTGWMLI TVICICLFIG
AMGKSAQFPL HVWLPDSMEG PTPISALIHA ATMVTAGIFM VARMSPLFEL SDTALSFIMV
IGAITALFMG FLGIIQNDIK RVVAYSTLSQ LGYMTVALGA SAYSVAVFHL MTHAFFKALL
FLAAGSVIIG MHHNQDIRWM GGVRKYMPIT WITSLLGSLA LIGTPLFAGF YSKDSIIEAV
HESHLAGAGF AHFAVLAGVF VTAFYSFRMY FLVFHGKERF DQNPDGHHHD ASEEPDPHHH
REEHQAPHES PWVVTVPLIL LAIPSVVIGF MTIQPMLFGE FFKDAIFFNA EKHPAMAELA
KAFHGPAQMA LHGLMTAPFW LALAGVVLAY YMYLVNPALP ARIKRAVQPL YTLLENKYYF
DWFNENVLAR ATRAMGTGLW KGGDEALIDG ALVNGSWKLV GWVSSVVRRL QSGYIYHYAF
GMIIGVFLLM TYFVWLNQ