Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3238 |
Symbol | |
ID | 4014084 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3427102 |
End bp | 3428886 |
Gene Length | 1785 bp |
Protein Length | 594 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942905 |
Product | ABC transporter related |
Protein accession | YP_550050 |
Protein GI | 91789098 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | [TIGR02204] ABC transporter, permease/ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00207534 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.825064 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCTCTT CTGCGTCTTC TGCGCCCCCC AAGGGCTCGC CCCGCTCCCT GTCGGGCCTC GTGCCCTTTC TGCGCCCTTA CCGCGGCCGG ATTGCGCTGG CGCTATTTTT TCTCGTCATG GCGGCCGTGG CCACGCTGGT CTTTCCGCTG GCGCTGCGCA GCCTCATCGA CGGCGGCCTG AGCGTGGCGG ACAAGGGCGC CCAACTGATG GCGCTGCGCA CCCACTTTTT CGAGCTGTTT GCCGTTGCCG CCGCACTGGG GCTTTTTTCA GCGGGCCGCT TTTACATGGT CAGCTGGCTC GGCGAACGGG TCACGGCCGA CCTGCGCAAT GCGGTGTATT CGCATGTGGT GCGGCAAAGC CCGGAGTTCT TTGAAACCAC GCAAACCGGC GAGGTGCTGT CGCGCCTGAC CGGCGACACG ACGCTGGTGC AAACCGTGGT GGGTTCGTCG CTGAGCATGG GTTTGCGCAA CGCCGTGATG GGCGTCGGCG CGCTGGGCAT GCTGGTCTAT ACCAACCCCT ACCTGATGGT TCAGGTGCTG GGGATTCTGG TGCTGATTGT GGCGCCCTCG GTGTGGTTTG GGCGGCGCGT GCGCAAGCTC TCGCGCGCCA GCCAGGACCG GGTGGCCGAC TCCAGCGCGA TCGCGGCCGA GGTGCTCAAT GCCATTCCCG TGGTGCAGAG CTACACCGCT GAAGCGCGCG AGGCCGCGCG CTTCGATGCC TCGACCACCA CCGCATTCAA CACCGCCATC CGGCGCACCA GGGCGCGTTC GGTGTTGGTG GCCTTCATCA TCATTGCCAC GTCGGCGGCC CTGCTCTGGG GCCTGTACCA GGGCACGCAG GCGGTGATGC GCGGCGACAT CAGCGCCGGC CACCTGGGCC AGACGGTGGT CTATGTGATC ATTCTGGCCA GCGCCACGGC GGTGCTCGGC GAGGTCTATG GCGACCTGTT GCGCGCGGCC GGTGCGACTG AGCGACTGAT GGAGCTGCTG GAAACACGCT CGCCCGTGGT TTCTCCATCA AAACCTGCTT CAGCCCCCGA AATACGGTCA GGAAGCGCTG TTAAATTTGA AGCAGTGACG TTTCATTACC CGTCACGCCC GGCGCAGGCG GCCTTGAGCA ACTTCGACTT GAGCGTGGCC CCGGGTGAAA CCGTGGCCCT TGTGGGGCCC AGCGGCGCCG GCAAAAGCAC GGTGTTCCAG TTGCTGCTGC GCTTTTACGA TCCAGCCTCG GGCCGCATTG AACTGGACGG CATGCGAACG GCGGACATGG CGCTGGAAGA TTTGCGCCAT CGCGTCGGCA TCGTGCCGCA GGATGCCGTG ATTTTCTCCA CCAGCGCGCT GGAAAACATC CGCTACGGCA AGCCCGATGC CACCGACGAA GAAACCAGAG CCGCAGCCAA AGCGGCGTTT GCGCACGAGT TCATCACGGC CCTGCCCGAA GGCTACGACA CCTTTCTGGG TGAGCGCGGC GTGCGCCTGT CGGGCGGGCA GCGCCAGCGC ATTGCGATTG CGCGGGCCAT GCTGAAGAAC TCTCCGCTGC TGCTGCTGGA TGAGGCCACC AGCGCGCTCG ATGCGGAGAG CGAACGCATG GTGCAGGCCG CGCTGGAGTC GGCCATGAAG GGCCGCACGA CGCTGGTTAT TGCGCACCGG CTGGCCACGG TGCAGAAGGC CGATCGCATC GTCGTGCTCG ACCACGGCCG TCTGGTCGAG CAGGGAACGC ACGCCGAACT GGTGAGCCGT GGCGGGGTCT ACGCACGGCT GGCGGCGCTG CAGTTCAACG CCTGA
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Protein sequence | MTSSASSAPP KGSPRSLSGL VPFLRPYRGR IALALFFLVM AAVATLVFPL ALRSLIDGGL SVADKGAQLM ALRTHFFELF AVAAALGLFS AGRFYMVSWL GERVTADLRN AVYSHVVRQS PEFFETTQTG EVLSRLTGDT TLVQTVVGSS LSMGLRNAVM GVGALGMLVY TNPYLMVQVL GILVLIVAPS VWFGRRVRKL SRASQDRVAD SSAIAAEVLN AIPVVQSYTA EAREAARFDA STTTAFNTAI RRTRARSVLV AFIIIATSAA LLWGLYQGTQ AVMRGDISAG HLGQTVVYVI ILASATAVLG EVYGDLLRAA GATERLMELL ETRSPVVSPS KPASAPEIRS GSAVKFEAVT FHYPSRPAQA ALSNFDLSVA PGETVALVGP SGAGKSTVFQ LLLRFYDPAS GRIELDGMRT ADMALEDLRH RVGIVPQDAV IFSTSALENI RYGKPDATDE ETRAAAKAAF AHEFITALPE GYDTFLGERG VRLSGGQRQR IAIARAMLKN SPLLLLDEAT SALDAESERM VQAALESAMK GRTTLVIAHR LATVQKADRI VVLDHGRLVE QGTHAELVSR GGVYARLAAL QFNA
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