| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3234 |
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| Symbol | |
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| ID | 4014080 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3421784 |
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| End bp | 3423352 |
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| Gene Length | 1569 bp |
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| Protein Length | 522 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637942901 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_550046 |
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| Protein GI | 91789094 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.201721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTTCAG CACCTGCCCC TGCCTACATC CAGCCGCCGC CGCTGACGGG CTCTGCCCGC
CTGTGGGGCA CGCTGGCGCT GTCGGCCGCC ACCTTCATGA ACGTGCTCGA CACGTCGATT
GCCAACGTCT CCCTGCCGGC CATTGCCGGC GACCTGGGCG TGAGCCCCAA CCAGGGCACC
TGGGTCATCA CCAGCTTTGG CGTGGCCAAC GCGATCGCCG TGCCGCTCAC CGGCTGGCTG
TCGCAGCGTT TCGGCCAGGT TCGCCTGTTC ACGGCCAGCG TCATGCTGTT TGTGCTCACA
TCATGGCTGT GCGGCCTGGC CCCCAACATG ACCACGCTGA TTTTTTTTCG TGTCCTGCAG
GGGCTGGTGG CGGGCCCGAT GATTCCGTTG TCGCAGTCAC TGCTGCTGTC AAGCTACCCC
AAGGCGCTGG CGGGACTGGC CATGGCGCTC TGGTCCATGA CCACGCTGGT CGCGCCTGTC
ATGGGGCCGC TGCTGGGCGG CTGGATCACC GACAACATTT CCTGGCCCTG GATTTTTTAC
ATCAACATTC CCGTGGGCTT TGGCGCCGCC TTCATCACCT GGAGCATCTT CAGGAAGCGT
GAAAGCGTGA CGCGCAAGCT GCCGATCGAC TCGGTCGGCC TGGCGCTGCT GGTGATCTGG
GTGGGTGCGC TGCAGATCAT GCTCGACAAG GGCAAGGAGC TCGACTGGTT TCACTCCGGT
GAGGTGGTGG CCCTGGGCAT TGTTTCGCTG GTGGGCCTGA TTGCCTTCGT CATCTGGGAG
CTCACCGAAG AGCATCCGGT GGTTGACCTG ACGCTGTTCA AGCGGCGCAA CTTCTGGGCG
GGTGCGGTGG CGCTGTCGGT GGGGTACGGC CTCTTTTTTG GCAACGTGGT GCTGCTGCCG
CTGTGGCTGC AGCAGTACAT GGGCTACACC GCCACACAGG CCGGCATGGT GATGGCGCCG
GTGGGGGCCA TGGCTCTGCT GCTGTCACCG CTGGTCGGCA AAAACATCGC CAAGGTCGAC
CCGCGCCGCT TCGCCGTGTT TGCCTTTCTG GTGTTTGCGC TGGTGCTGTG GATGCGTTCC
AACTTCAACA CCCAGGCTGA TTTCAACACC ATCCTGATAC CCACCATTAT CCAGGGTGTG
GCCATGGCTT TCTTCTTCAT CCCGTTGGTC ACCATCACGC TGTCGGGCAT CTCGCCCGAG
AAGATTCCGG CGGCTTCGGG CCTGTCGAAC TTCGTGCGCA TCACGGCGGG CTCCTTCGGC
ACGTCAATCG CCACCACCAT CTGGCAAGAC CGCGCCGCCA TGCACCATGC CCAAGTGAGC
GAATACGTCA ACCAGGGAAG CACCGCCACC AGCAGCGCAC TGACGGGCCT GGCCGGGGCC
GGGCTTACAC CCGACCAGGC ACTGGGCACC ATCAATCGCC TGGTGGATCA GCAGGCCTAC
ATGCTGGCGG CGAACGATGT GTTCTATGTG TCCGCGCTGA TTTTCCTGTT GCTGATTCCG
CTGGTGTATT TGACGCGGCA CACCAGGGTC GGGGCAGGGA GTTCGGATGC TGCGGCTGGG
GCGCATTGA
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| Protein sequence | MASAPAPAYI QPPPLTGSAR LWGTLALSAA TFMNVLDTSI ANVSLPAIAG DLGVSPNQGT
WVITSFGVAN AIAVPLTGWL SQRFGQVRLF TASVMLFVLT SWLCGLAPNM TTLIFFRVLQ
GLVAGPMIPL SQSLLLSSYP KALAGLAMAL WSMTTLVAPV MGPLLGGWIT DNISWPWIFY
INIPVGFGAA FITWSIFRKR ESVTRKLPID SVGLALLVIW VGALQIMLDK GKELDWFHSG
EVVALGIVSL VGLIAFVIWE LTEEHPVVDL TLFKRRNFWA GAVALSVGYG LFFGNVVLLP
LWLQQYMGYT ATQAGMVMAP VGAMALLLSP LVGKNIAKVD PRRFAVFAFL VFALVLWMRS
NFNTQADFNT ILIPTIIQGV AMAFFFIPLV TITLSGISPE KIPAASGLSN FVRITAGSFG
TSIATTIWQD RAAMHHAQVS EYVNQGSTAT SSALTGLAGA GLTPDQALGT INRLVDQQAY
MLAANDVFYV SALIFLLLIP LVYLTRHTRV GAGSSDAAAG AH
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