| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3227 |
|---|
| Symbol | |
|---|
| ID | 4014112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3417282 |
|---|
| End bp | 3417719 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637942894 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_550039 |
|---|
| Protein GI | 91789087 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0589] Universal stress protein UspA and related nucleotide-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0705229 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTACAAGC GGATTTTGCT GGCGTACGAC GGCTCCAAGT CCGGGCAAAA AGCGTTGCTC
GACTGCCGGG ACATTGCGCA GTGGAGCCAG GCGTCAGTGA ACCTGATTGC CGTCACGCCG
CTCTACATGC AGGTGATGGG CGTCGAAGGC GGCATTTACG ACAGCGGCCT TGCCGAGCAG
GAGAAAGAAA AGTACCAGGG CATTCTGGAT GAAGGTTTGC GCCAGTTGGT CAGCGCCGGC
TACCAGGCCC GTGGGGAGGT TCTGCTGGGT GAAACCGTCG ATGAAATCAC CAAATATGCC
AAGAAGATCG AGGCCGATCT GATCGTGGTG GGCCACAAGC ATCTGGATGG GTGGGCTGCC
CGCTGGTGGC GGGGCTCGGT TTCCAAATCG CTGATCGAGC ACGCACCCTG CAGTGTGCTC
GTGGTCATCG TTCACTGA
|
|---|
| Protein sequence | MYKRILLAYD GSKSGQKALL DCRDIAQWSQ ASVNLIAVTP LYMQVMGVEG GIYDSGLAEQ
EKEKYQGILD EGLRQLVSAG YQARGEVLLG ETVDEITKYA KKIEADLIVV GHKHLDGWAA
RWWRGSVSKS LIEHAPCSVL VVIVH
|
|---|
| |