Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3218 |
Symbol | |
ID | 4014103 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3406109 |
End bp | 3407248 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942885 |
Product | ABC transporter related |
Protein accession | YP_550030 |
Protein GI | 91789078 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
TIGRFAM ID | [TIGR03265] putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.146375 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATATGA GACTGCCAGC GGAAATGGCG AGCTTTGCCT CGCCGCATCA CACGACCGGC ATTGCGCTGG GTATCGAGGG CGTGCACAAG CGCTTTGACA AGGTCACGGT GCTCCAGCAC ATAGACCTGG AGGTCCGGCA GGGCGAGATG CTGTGCCTGC TCGGGCCCTC CGGCTGCGGG AAGACCACGT TGCTGCGCAT CATTGCCGGC CTGGAAACGC AGACCAGCGG CCGCATCGTG CAGAACGGCC GCGATATTTC CTGGCTGCCG CCGGTCAAGC GCGACTACGG CATCGTGTTC CAGTCCTACG CCCTGTTTCC CAACCTCACC ATCGCCGGGA ACGTGGCCTA CGGCCTGGTG AGCCGGAAAA AACCGCGGGC TGAAATCAGC GCCCGCGTCG CGGAACTGCT CAAGCTGGTG GGCCTGCCGA CGTCGGGGGA AAAGTATCCG GCCCAGCTGT CGGGCGGGCA GCAGCAGCGC GTGGCACTGG CGCGTGCGCT GGCGACCGCG CCGCGCCTGT TGCTGCTGGA TGAACCCCTG TCGGCGCTGG ATGCGCTGGA GCGCATCCGC CTGCGCGGCG AGATCCGCCG GCTGCAGCAG AAACTGGGCG TGACCGCCAT CATGGTCACG CACGACCAGG AGGAGGCGCT GTCCATGGCC GACCGCATTG TCGTGATGAA CCACGGGGTG ATCGAGCAGA TCGGCACACC GAACGACATC TATGAGCGCC CCGCCACGCC CTTCGTGGCG GATTTTGTCG GCAAGGTCAA TGTGTTGCCG GCCATCGCGC TCGGGCAGGG GCGTTTTCGC GCCGGCCGCC TGGAGCTGCA TTGCAGCGGC GAGCATGGCG ATTACACGGC CGGCCAGGCG GTCAGGCTCT ACCTGCGTCC GGAAGACCGG GCGGTGGGCC ATGAACGCGA AGGGCAGCCG AACCGCGTCC GCGGCGAAGT CCTGAAGGTT GAATTCCTGG GCAGCTCGTG CCTGGCGGAA ATGCAGATCG ACGAGCTCGA GGGCCAGTCG CTGCACCTGT GTTTTTCGCT GAACCAGCTG CACGACCTGG GTGTGCAGGC CGGTGCGCGG ATTGACCTGG CGCTGCGCAG CGAACGCATC CGGGTGTTTC CGGCTGGGGT ATCCCTGTGA
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Protein sequence | MDMRLPAEMA SFASPHHTTG IALGIEGVHK RFDKVTVLQH IDLEVRQGEM LCLLGPSGCG KTTLLRIIAG LETQTSGRIV QNGRDISWLP PVKRDYGIVF QSYALFPNLT IAGNVAYGLV SRKKPRAEIS ARVAELLKLV GLPTSGEKYP AQLSGGQQQR VALARALATA PRLLLLDEPL SALDALERIR LRGEIRRLQQ KLGVTAIMVT HDQEEALSMA DRIVVMNHGV IEQIGTPNDI YERPATPFVA DFVGKVNVLP AIALGQGRFR AGRLELHCSG EHGDYTAGQA VRLYLRPEDR AVGHEREGQP NRVRGEVLKV EFLGSSCLAE MQIDELEGQS LHLCFSLNQL HDLGVQAGAR IDLALRSERI RVFPAGVSL
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