| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3213 |
|---|
| Symbol | |
|---|
| ID | 4014137 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3399494 |
|---|
| End bp | 3400954 |
|---|
| Gene Length | 1461 bp |
|---|
| Protein Length | 486 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637942880 |
|---|
| Product | TM helix protein |
|---|
| Protein accession | YP_550025 |
|---|
| Protein GI | 91789073 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.529906 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGT CAACCTTCGT CACCTCGCTG CAAGCCAGCC TGGGCGCGAA TCTCCCCAAA
GTCCTCGGCG CTGTCGCCAT CCTGGCCCTG GGCTGGCTGC TGGCTGTTGC GGCGCGCGCG
GGCATGCGCA GGCTGCTGCG GCTGCTCCAG GTCAATACCC GCGTCGAGGA AAGCACGGGC
GTGCAACTGG ATGCTGAATC GCCGGTGGCG GTGGGCGTGT TCTGGCTAAT CCTGCTGGCC
ACGCTGGTCG CCGTGCTCAA TGTGCTGGAC CTCTCACTGC TGACCAACCC CTTCGCCGCC
ATGATGGGCG ACATCATCGG TTATCTGCCC AAGCTGCTCG CTGGAGCCGT GCTGTCATTG
GTAACCTGGT TGCTCGCCAC CGTGCTGCGC GCGCTGGCCG CCCGGGCGCT TGCCGCCACG
ACACTCGACG AAAAACTCTC CACCGAGGCC GGCATGGCGC CCATGAGCCA GAACGTGGGC
AATGTGCTGT TCTGGCTTGT GATTCTCATG CTGCTGCCGG CCATCCTGAA CGCCTTCCAG
CTCAATGCCC TGCTCGAACC GGTGATCGGC ATGCTCAACA AGCTGCTGGC CATGGTGCCC
AACATGTTCG CGGCCCTGCT GATCGGCGGC GTGGGCTACA TCGTGGCCCG CGTGCTGCGC
GGCCTGGTGA CCAACCTGCT GGCAGCGGCC GGCGCCGACA GCCTGAACCA GCGGGTCGGG
CTCGATAGCT CCATTCGCCT GTCGGCCCTG GCGGGCACAG TGGTCTTTAT CTTCGTGTTC
GTGCCCTCGC TGATCGCTGC GCTCGACGCG CTCAAGATCA ATGCCGTGTC GCGTCCGGCC
TCGCAAATGC TCGACCTGAT GTTTGCCGCC GTGCCGCACA TCGTGGCGGC GTCAGTGATC
CTGCTGCTGA CCTGGTACAT CGCGCGCTTC GCCTCGCGCC TGCTGGCCAG CTTGATGGAA
AGCGCCGGGG CCGACAATCT ACCGCAAAAA ATGGGCATAC AGCATGTGCT GTCGGGTGCC
GCCCGGCCCT CGCGCCTGGC CTCGGCGCTC CTGATGTTCT TTGCCATGCT GTTTGCCGCT
ACCGAGGCCG CCAGCCAGCT CGGTTTCGGC CAGATGCGGA ACATGGTGTC CTCCTTCATC
GGGTTCGCTG CGGATGTGCT GCTGGGCGGC GCCATCCTGG CCGTCGGGTT CTGGATTTCC
AACCTGGCCT ATGACGCCAT CCACAAGGCC GGCGGCAAAC ACGCGGCCGG CCTCGCAGAG
ATTGCCCGCA TTGGCATCCT GGGCCTGGTG ATCGCCATGG GGCTGCGCGC CATGGGCCTT
GCCAACGAAA TCGTGCAACT GGCCTTCGGC CTGACGCTGG GCGCGGTGGC CGTTGCCGTG
GCGCTGTCGT TCGGGCTGGG TGGCCGCGAG GCCGCAGGCA AGCTGGCAAC GCGTTGGCTG
GAGCGCTGGT ATAAGGATTA G
|
|---|
| Protein sequence | MDLSTFVTSL QASLGANLPK VLGAVAILAL GWLLAVAARA GMRRLLRLLQ VNTRVEESTG
VQLDAESPVA VGVFWLILLA TLVAVLNVLD LSLLTNPFAA MMGDIIGYLP KLLAGAVLSL
VTWLLATVLR ALAARALAAT TLDEKLSTEA GMAPMSQNVG NVLFWLVILM LLPAILNAFQ
LNALLEPVIG MLNKLLAMVP NMFAALLIGG VGYIVARVLR GLVTNLLAAA GADSLNQRVG
LDSSIRLSAL AGTVVFIFVF VPSLIAALDA LKINAVSRPA SQMLDLMFAA VPHIVAASVI
LLLTWYIARF ASRLLASLME SAGADNLPQK MGIQHVLSGA ARPSRLASAL LMFFAMLFAA
TEAASQLGFG QMRNMVSSFI GFAADVLLGG AILAVGFWIS NLAYDAIHKA GGKHAAGLAE
IARIGILGLV IAMGLRAMGL ANEIVQLAFG LTLGAVAVAV ALSFGLGGRE AAGKLATRWL
ERWYKD
|
|---|
| |