Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3205 |
Symbol | |
ID | 4014129 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3390728 |
End bp | 3391546 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942872 |
Product | ABC transporter related |
Protein accession | YP_550017 |
Protein GI | 91789065 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00011421 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATACCA CCTCACCCAA CCACTCACCC AACGCCTCCT CCCCTCTGGT CATGCAGGCC CGGGGCCTGG TCAAACGCTA CGGCCAGGTG ACTGCGCTGG ACGGCACCGA CTTTGAGCTG CGCGCCGGTG AAATCCTGGC GGTGATCGGT GACAACGGCG CCGGCAAGTC CTCCCTGATC AAGGCCCTGT CGGGGGCGAC CGTGCCCGAC GAAGGCGAGT TGCTGCTGGA CGGCAAGCCG GTGCGCTTCA AGTCCCCCAT CGATGCACGC CGGGCCGGCA TAGAGACCGT CTACCAGGAC CTGGCCGTTG CCCCGGCCAT GAGCATTGCC GAAAACCTGT TCCTCGGCCG TGAGCTCATC AAGACCAGAG GCCTTGGCAA ACTGCTGCAC CTGCTCGACA AGAAGCGGAT GCTGGAGCAG GCCATTGCCC GCATGCAGGA GCTCAAGGTC GGGATTCGCT CGATGACGCA AGCGGTGGAG ACGCTCTCCG GCGGCCAGCG CCAGTGCGTG GCCGTGGCGC GCGCCGCTGC CTTCGCACAG CACGTGGTGA TCATGGACGA GCCCACGGCC GCGCTGGGCG TGAAGGAAGG CAACATGGTG CTGGAGCTGA TTCGCCGGGT GCGCGACAAG GGCCTGCCCG TGATCCTGAT CAGCCACAAC ATGCCGCATG TGTTCGAGGT GGCCGACCGC ATCCATATCC AGCGCCTGGG CCGGCGTGCG GCCGTCGTCA ACCCCAAAAC CATCAGCATG AGCGATACCG TCGCCGTGAT GACTGGCGCC AAGACGGCCG AAGAACTGCC GCAGGCCGCA CTGGCCTGA
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Protein sequence | MNTTSPNHSP NASSPLVMQA RGLVKRYGQV TALDGTDFEL RAGEILAVIG DNGAGKSSLI KALSGATVPD EGELLLDGKP VRFKSPIDAR RAGIETVYQD LAVAPAMSIA ENLFLGRELI KTRGLGKLLH LLDKKRMLEQ AIARMQELKV GIRSMTQAVE TLSGGQRQCV AVARAAAFAQ HVVIMDEPTA ALGVKEGNMV LELIRRVRDK GLPVILISHN MPHVFEVADR IHIQRLGRRA AVVNPKTISM SDTVAVMTGA KTAEELPQAA LA
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