| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3204 |
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| Symbol | |
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| ID | 4014128 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | + |
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| Start bp | 3389682 |
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| End bp | 3390728 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942871 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_550016 |
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| Protein GI | 91789064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.0000146759 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGGC AGTTGCCCGA AGCAGACCTT GGGTTGGCGG GACCGCCTGA GCGCGCCCCT
GTTCCTTCAA TCACTTCGAG GGGTTCACCG ATGAATTCAA CTTCACGCCA CATCCCGTGG
GGGGCCCTGG GCCCCTGGCT GGCCCTGCTG GCCACCTGCA TCTTTTTTAC CACCCAGTCA
GACCGTTTCC TGACCGGTGA AAACCTGTCA CTGGTGCTGC AGCAGGTGAT GGTTGTGGGC
ATCCTGGCCA TCGGCCAGAC CCTGATCATC CTGACTGCCG GCATCGACCT GTCATGCGGC
ATGGTCATGG CACTGGGCAG CATGATCATG ACCAAGTTCG CGGTGAACTA CGGCATCAAC
CCCTACCTGG CCATTGTCTG CGGGCTGGCG GTCACCACCG GCTTTGGACT CATCAACGGC
CTGCTGGTCA CCCGCGTCAA GCTGCCCCCC TTCATCGTGA CGCTGGGCAC CCTGAACATC
GCGTTCGCCA TCACCCAGAT TTACTCCAAC GCGCAAATCA TTTCCAACCT CCCGGATGAA
ATGACCGCCC TGGGCAACAC CTTCAGCCTG GGCAGCACCG AAGTCAGCCT GGGGACGGTC
ACGATGATCG CCCTGTACGC CCTCGCATGG TTCGTGCTGC GGGAGACCGC GCCGGGCCGC
CACCTGTACG CGGTGGGCAA CAACGCCGAA GCCGCGCGCC TGACCGGCAT CCGGGTCGAC
CGCGTGCTGG TGACGGTCTA TGCGCTGGCG GGTCTTTTTT ACGGCATTGC CGCGCTGTTG
TCGGTCGCGC GCACCGGCGT GGGCGACCCC AACGCCGGGC AAACCGAAAA CCTGGATGCC
ATCACCGCCG TGGTGCTGGG CGGCACCAGC CTGTTTGGCG GGCGCGGCAT CATCCTGGGC
TCGCTGGTGG GCGCGGTGAT TGTGGGCGTG TTCCGCAATG GCCTGACGCT GATGGGCGTT
GCCTCCGTTT ATCAAACGCT GATCACCGGC ATCCTGGTGA TCCTCGCAGT CGCTGCTGAC
CAGATGTCGC GCAAGGGGCC CCGCTGA
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| Protein sequence | MTRQLPEADL GLAGPPERAP VPSITSRGSP MNSTSRHIPW GALGPWLALL ATCIFFTTQS
DRFLTGENLS LVLQQVMVVG ILAIGQTLII LTAGIDLSCG MVMALGSMIM TKFAVNYGIN
PYLAIVCGLA VTTGFGLING LLVTRVKLPP FIVTLGTLNI AFAITQIYSN AQIISNLPDE
MTALGNTFSL GSTEVSLGTV TMIALYALAW FVLRETAPGR HLYAVGNNAE AARLTGIRVD
RVLVTVYALA GLFYGIAALL SVARTGVGDP NAGQTENLDA ITAVVLGGTS LFGGRGIILG
SLVGAVIVGV FRNGLTLMGV ASVYQTLITG ILVILAVAAD QMSRKGPR
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