Gene Bpro_3199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3199 
Symbol 
ID4014123 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3383238 
End bp3384653 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content67% 
IMG OID637942866 
ProductN-acetylmuramoyl-L-alanine amidase 
Protein accessionYP_550011 
Protein GI91789059 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0860] N-acetylmuramoyl-L-alanine amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.384074 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAATA AAAGCGGTCG CCACTTCAAC CGGCGCAGCG CCTTGCAGCT GGGCGGCGTG 
GTCCTGCTGC TGGGCGCGCA GCACATTGCC CGTGGCGCCA CCATTGTCGC CGTGCGCGTC
TGGCCGGCCA AAGACTACAC CCGGGTCACC ATCGAGTCCG ACGGTGAAAT CAAGGCGCGG
CAGTTCTTTG TGGCCGAGCC GCCGCGCCTG GCGGTTGACA TTGAGGGCAT AGACCTGATT
CCGGCCTTGC GCGAGTTGGT GGCCAAGGTG AAATCGGACG ATCCGAATAT TTCAGGGATT
CGCGTCGGGC AAAACGCACC AGGCGTGGTG CGGCTGGTGA TTGACCTGAA GCAGGCCATG
CTGCCGCAGG TCTTCACGCT TCCGCCGGTG GCTGCTTACC AGCACCGGCT GGTGCTGGAC
CTGTACCCGG CGCAGGCCAT CGACCCGCTG GAGGCCCTGA TTGCCGAGCG GCTGGCCGAC
AAGCAGGCCG GCGCCGGCTC ATCCACGAGC GCAGCCCCCG ACCCGCTGGG CGAGTTGATC
GCCCGCCAGA CCGGACGAGC CCCATCGGGC GCAATGGCCG GTGGCGACAA GCCAGCGGGC
AACCCGCCGC TGGCTGGCTC TGCAGACGAC CGCTTGCCCT TACCGGCCGC CCGGCCGCCT
GGCGACATGG CGGCCGCTGG CAAGGGACGG ACCGAAGGCA AGACAGACCG GCTCGTCATC
GTGGCGCTGG ACCCGGGACA TGGCGGCGAG GACCCGGGCG CGGTTGGGCC CGGTGGCACA
CGCGAGAAAG ACGTGGTGCT GCAAATCGCG CATCGCCTGC GCGACCGCAT CAACCAGCAA
CCGAACATGC GCGCCTACCT CACGCGCGAT GCGGATTTTT TTGTGCCGCT GCACATCCGC
GTGCAAAAAG CGCGCCGCGT GCAGGCCGAT CTTTTCATCA GCATCCATGC GGACGCCTTC
TTTACCGCCC GCCCGCAAGG CGCCAGCGTG TTTGCCTTGA GTGACAAGGG CGCCTCCAGC
AGCGCCGCGC GCTGGCTGGC CGAGAAGGAA AATTCCGCCG ACCTCGTGGG CGGCGTCAAT
GTGAAGGCCC GGGACGTGCA GGTCCAGAAG GCCCTGCTGG ACATGAGCAC CACCGCGCAG
ATCAATGACA GCCTCAAGCT GGGCAGCGCC ATGCTGGGCG AGATCGGCCA TGTCGGCAGG
CTGCACAAGC CGCGGGTTGA ACAAGCCGGC TTTGCGGTGC TCAAGGCGCC CGACATCCCC
AGCGTGCTGG TAGAAACCGC CTTCATCAGC AATCCGGAGG AAGAAGCCCG ATTGCGCAGC
GATGACTATC AGATCCAGCT CGCGGATGCG CTGATGCGCG GCATCAGCCG CTACTTTGCC
CGCAACCCGC CGCTGGCGCG GAATCGCGCT CTGTAG
 
Protein sequence
MTNKSGRHFN RRSALQLGGV VLLLGAQHIA RGATIVAVRV WPAKDYTRVT IESDGEIKAR 
QFFVAEPPRL AVDIEGIDLI PALRELVAKV KSDDPNISGI RVGQNAPGVV RLVIDLKQAM
LPQVFTLPPV AAYQHRLVLD LYPAQAIDPL EALIAERLAD KQAGAGSSTS AAPDPLGELI
ARQTGRAPSG AMAGGDKPAG NPPLAGSADD RLPLPAARPP GDMAAAGKGR TEGKTDRLVI
VALDPGHGGE DPGAVGPGGT REKDVVLQIA HRLRDRINQQ PNMRAYLTRD ADFFVPLHIR
VQKARRVQAD LFISIHADAF FTARPQGASV FALSDKGASS SAARWLAEKE NSADLVGGVN
VKARDVQVQK ALLDMSTTAQ INDSLKLGSA MLGEIGHVGR LHKPRVEQAG FAVLKAPDIP
SVLVETAFIS NPEEEARLRS DDYQIQLADA LMRGISRYFA RNPPLARNRA L