Gene Bpro_3172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3172 
Symbol 
ID4014174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3357969 
End bp3358757 
Gene Length789 bp 
Protein Length262 aa 
Translation table11 
GC content63% 
IMG OID637942839 
Productbeta-lactamase-like 
Protein accessionYP_549984 
Protein GI91789032 
COG category[R] General function prediction only 
COG ID[COG1235] Metal-dependent hydrolases of the beta-lactamase superfamily I 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.605921 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.747718 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCCTGCTG CACTGGTGCT GAGGTTCAAA AGCCTGGGCA GTGGCAGTTC GGGCAATGCC 
ACACTGGTGG AGGCCTTGGG CCTGCTGCCC TTTCGGGTGC TCATTGACTG CGGGCTGGGG
CTCAAGCACC TCGTGTACCG GCTGGGCCAG GCCGGGCTTC AACCAGAAGA CATCGACGCA
GTCTTCATTA CCCACGAGCA TGGCGACCAC ATTGGTTGCG CGCGTTCGCT GTCCCTGCGT
TACCGCATCC CCGTCTGGAT GAGCCACGGC ACCCATGCCG CTACCGGCTC ACCGGATTTT
GACGGCCTGC TCCGCACGGC CAGAGATGGT GAAACCATTG AGCTTGGCGG ACTTCAGCTC
ACCCCCTTCA CCGTACCGCA TGATGCCAGG GAGCCCTTGC AACTCACCTG CACCGATGGC
TCGGCGAAGC TGGGAATTTT GACGGACCTG GGACATGCGA CGGCACACGT CATCGCGCAC
CTGAAGGCCT GCGATGCGCT GCTGCTGGAG TGCAACCACG ACACCGAGAT GCTGGCCCAA
TCGGCCTATC CCGCATTTCT GAAGCGACGG GTCGGCGGCC AGTACGGCCA CCTTGCCAAC
GCCGCAGCGG CAGACATCGC CCGCGCCGTG CGGCACCCCG GCCTCAAGCA TCTGGTGGCA
GCCCATTTAA GCGCACAAAA CAACCGGCCT GCGCTGGTTC AGGACGTAAT GGCAGAGGCT
TTGTCGTGCG CGCCAGAGGA CATCATCGTT GCGAAACCCG ATGACGGAAG CTGCTGGCTC
CAGATCTGA
 
Protein sequence
MPAALVLRFK SLGSGSSGNA TLVEALGLLP FRVLIDCGLG LKHLVYRLGQ AGLQPEDIDA 
VFITHEHGDH IGCARSLSLR YRIPVWMSHG THAATGSPDF DGLLRTARDG ETIELGGLQL
TPFTVPHDAR EPLQLTCTDG SAKLGILTDL GHATAHVIAH LKACDALLLE CNHDTEMLAQ
SAYPAFLKRR VGGQYGHLAN AAAADIARAV RHPGLKHLVA AHLSAQNNRP ALVQDVMAEA
LSCAPEDIIV AKPDDGSCWL QI