| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3165 |
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| Symbol | |
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| ID | 4014167 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3349660 |
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| End bp | 3351639 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637942832 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_549977 |
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| Protein GI | 91789025 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.229588 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGACA AACTATCTAC CGCAAGCAAC GAATATTCCG AAGGCTCCAT CCGCGTGCTC
AAGGGCCTGG AGCCCGTCAA GCAACGGCCG GGCATGTATA CGCGCACCGA CAACCCGCTG
CACATCATCC AGGAGGTTCT GGACAACTCG GCTGATGAGG CGCTGGCCGG GTATGGCAAA
AAGATCAAGG TCACGCTGCA CACCGACGGC TCGGTGAGCG TGGAAGATGA CGGCCGCGGC
ATCCCGTTTG GCCTGCACCC GGAAGAAAAA GCACCGGTGG TCGAGCTGGT GTTCACCCGC
CTGCATGCCG GCGGCAAGTT CGACAAGGGC AAGGGCGGCG CTTATAGCTT CTCGGGTGGC
CTGCACGGCG TGGGGGTGAG CGTCACCAAC GCCTTGTCAA AACGGCTTGA AGTGATGTCT
TACCGCGAAG GCATGGTCGC CCGGCTGGTG TTTTCAGGTG GCGATGTCAT TGAAAAACTG
CAGTTGCGCA AGGCTGCTGA AGGCGACCGC AAGTGCGGTA CTTCCGTGCG TGCCTGGCCG
GACGCCAAAT ACTTCGAGTC TGCCGCTCTG CCCATGGCCG AGTTGACGCA TTTGCTGCGC
AGCAAGGCCG TGTTGATGCC CGGCGTGACT GTCACGCTGA CCAACGAGAA GACCAAAGAA
ACGCAGACCT GGGCCTACAA AGGCGGCCTG CGCGACTACC TGATGCAGAC CCTCACTGCC
GATCCGGTGA TTCCGATGTT TGAAGGCGAG GGCTTTGCCG ATGCCTCGCA CGACAGTTTT
GCCGAGGGTG AGGGCGCCCA GTGGTGTGTG GCCTTTACCG AAGACGGTCA GCCCATGCGC
GAAAGCTACG TCAACCTGAT CCCGACCAGT GCCGGCGGTA CGCACGAGAG CGGGCTGCGC
GATGGCTTGT TCACTGCTGT CAAGAGCTTT ATCGATTTGC ATTCGTTGCT ACCCAAGGGC
GTCAAGTTGC TGCCCGAGGA TGTGTTTGCC CGGGCCAGCT ATGTGCTTTC CGCCAAGGTG
CTGGACCCGC AGTTTCAGGG TCAGATCAAG GAACGCCTGA ACTCGCGCGA TGCGGTGCGG
CTGGTGTCGA GCTTTGTGCG CCCCACGCTG GAGCTGTGGC TGAACCAGCA TGTCGACTAC
GGAAGAAAGC TGGCCGAACT CGCCATCAAG GCTGCGCAAA CCCGCCAGAA GGCTGGCCAG
AAGGTTGAAA AACGCAAGGG CTCCGGCGTG GCCGTGCTGC CGGGCAAGCT GACCGATTGT
GAAAGCAAGG ACCTGGCACA CAACGAGGTC TTCCTGGTCG AGGGCGACTC GGCGGGCGGC
AGTGCCAAGA TGGGGCGCGA CAAGGAAAGC CAGGCCATCC TGCCGCTGCG CGGCAAGGTG
CTCAACACCT GGGAGGTCGA GCGTGACCGG CTGTTCGCCA ACACGGAAAT CCACGATATT
GCCGTGGCCA TCGGGGTCGA TCCGCATGGC CCCCATGACA AGCCGGACCT GAGCGGCCTG
CGCTACGGCA AGGTCTGCAT CCTCAGCGAC GCCGACGTTG ACGGCTCGCA TATCCAGGTG
CTGCTTTTGA CCCTCTTTTT TCGCCACTTC CCCAAACTGA TTGAAGCTGG TAATGTGTAT
GTGGCGCGCC CGCCGCTGTT TCGGGTGGAT GCGCCGGCCC GCGGCAAGAA GCCGGCGTCC
AAGGTGTATG CCCTGGACGA AGGTGAATTG ACCGCCATAT TGGACAAGTT GCGCAAGGAC
GGCGTGCGAG AGAACGCCTG GAGCATCAGC CGCTTCAAGG GGCTGGGCGA AATGAGTGCG
GAACAGTTGT GGGAAACCAC GCTCAACCCG GACACCCGGC GCCTATTGCC CGTGCAGTTG
GGCAACTTTG ATTTTCTGCA AACCGAGAGC CTGATCACCA AGCTGATGGG TAAAGGCGAG
GCTGCGGCGC GGCGCGAACT GATGGAGTTG CACGGCGATG CCGTGGAGAT TGATATTTGA
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| Protein sequence | MADKLSTASN EYSEGSIRVL KGLEPVKQRP GMYTRTDNPL HIIQEVLDNS ADEALAGYGK
KIKVTLHTDG SVSVEDDGRG IPFGLHPEEK APVVELVFTR LHAGGKFDKG KGGAYSFSGG
LHGVGVSVTN ALSKRLEVMS YREGMVARLV FSGGDVIEKL QLRKAAEGDR KCGTSVRAWP
DAKYFESAAL PMAELTHLLR SKAVLMPGVT VTLTNEKTKE TQTWAYKGGL RDYLMQTLTA
DPVIPMFEGE GFADASHDSF AEGEGAQWCV AFTEDGQPMR ESYVNLIPTS AGGTHESGLR
DGLFTAVKSF IDLHSLLPKG VKLLPEDVFA RASYVLSAKV LDPQFQGQIK ERLNSRDAVR
LVSSFVRPTL ELWLNQHVDY GRKLAELAIK AAQTRQKAGQ KVEKRKGSGV AVLPGKLTDC
ESKDLAHNEV FLVEGDSAGG SAKMGRDKES QAILPLRGKV LNTWEVERDR LFANTEIHDI
AVAIGVDPHG PHDKPDLSGL RYGKVCILSD ADVDGSHIQV LLLTLFFRHF PKLIEAGNVY
VARPPLFRVD APARGKKPAS KVYALDEGEL TAILDKLRKD GVRENAWSIS RFKGLGEMSA
EQLWETTLNP DTRRLLPVQL GNFDFLQTES LITKLMGKGE AAARRELMEL HGDAVEIDI
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