| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3163 |
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| Symbol | |
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| ID | 4014165 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3346214 |
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| End bp | 3348568 |
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| Gene Length | 2355 bp |
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| Protein Length | 784 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637942830 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_549975 |
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| Protein GI | 91789023 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.960241 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.258195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATCTCT TTACACCGGA CGCAGTAGCC CCGATCCCCG AACCTGCTGA CCAGGACTCG
CTCGCCGCCT ATGCGCAGCG CGCCTACCTG GAATACGCGC TGAGCGTTGT CAAGGGCAGG
GCGCTGCCCG ACGTGTGCGA TGGCCAGAAG CCCGTGCAGC GGCGCATTTT GTACAGCATG
GCGCGCATGG GCCTGGGCTT TGGCGGCGCC AATGGTGCAA GCGGGGCCAA GCCGGTCAAG
AGCGCGCGCG TCGTCGGCGA CGTGCTCGGC AAATACCATC CGCACGGCGA CCAGGCGGCT
TACGACGCGA TGGTGCGCAT GGCGCAGGAC TTCAGCCAGC GTTACCCGCT GGTCGACGGC
CAGGGCAATT TCGGCTCGCG CGACGGCGAC GGGGCGGCGG CCATGCGTTA TACCGAGGCT
CGGCTGGCGC GCATCACAAC CTTGTTGCTC GACGAACTCG ACGAAGGCAC GGTCGACTTT
GCGCCGAATT ACGATGGCTC GTTCGAAGAG CCGCGCCAGT TGCCGGCGCG CCTGCCGTTC
ACGCTGCTTA ACGGCGCCAG CGGCATTGCC GTGGGCCTGG CCACCGAGAT TCCCAGCCAC
AACCTGCGCG AAGTGGCCGA CGCCTGCGTC GCCCTGATCA AGACGCCCAG GCTCAGCGAT
GAAGAGCTGT ACACGCTGAT CGCCGGTCCC GACTACCCGG GCGGCGGACA GATCATTTCC
AGCACGGCGG AAATTGCGGC GGCCTACAGC ACCGGCCGGG GTTCTCTCAA GGTACGCGCG
CGCTGGAAGA TTGAGGACCT GGCCCGCGGC CAGTGGCAGC TGGTGGTGCA GGAGTTGCCT
CCCGGCGTCA GCACCCAGCG CGTGCTGGAA GAGATTGAAG AGCTGACCAA TCCCAAGATC
AAGGCCGGCA AAAAGGCCTT GAGCCAGGAG CAGGTGCAGC TCAAGCAGAC CGTGCTGTCG
GTGCTCGATG TGGTGCGCGA TGAGTCCAGC AAGGACGCCG CGGTGCGCCT GGTGTTCGAG
CCCAAGACCA GCAGAATCGG GCAGTCCGAG CTCATCAATA CCTTGCTGGC GCACACCAGC
CTGGAGAGCT CTGCCTCCAT CAACCTGACC ATGGTCGGGC TCGACGGCAA GCCGACGCAA
AAGACGCTGC GGCAGATGCT GGGCGAGTGG ATCGAGTTCC GCCAGGCCAC GGTGCAACGG
CGCTCGCAGC ACCGGCTCGA TAAGGTCCTC GACCGCATTC ACATCCTCGA GGGACGGCAG
CTGGTGCTGC TCAACATCGA TGAGGTAATT GCCATCATCC GCCAGTCGGA CGAACCCAAG
GCCGCGCTGA TCGCCCGCTT CTCGTTAAGC GAGCGGCAGG CCGAAGACAT CCTCGAAATC
CGCCTGCGCC AGCTGGCGCG GCTTGAGGCC ATCAAGATCG AGCAAGAGCT CAAAACCCTG
CGCGAAGAGC AGGGCAAGCT CGAGGAAATC CTGGGCAGCC CGGCGGCGCT TCGCCGGCTG
CTGGTCAAGG AAATTGAAGC GGACGCCAAA CAGTTTGCCG ACCCGCGCCG CACGCTGATC
CAGGCCGAGA AAAAGGCTGT GCTCGAAGTC AAGGTGCTGG ACGAGCCGGT CACGGTGGTG
GTGAGCGCCA AGGGCTGGGT GCGCGCCCGC TCGGGCCACG GCCACGACGC TGCAAGCTTT
GCCTTCAAGG CGGGCGACGG CCTGTACGCC ACGTTCGAAT GCCGTACCGT CGATACCCTG
CTGGCCTTTG GCTCACGCGG CCGTATTTAC TCTGTCCCGG TGGCGTCCCT GCCGGGCGCG
CGCGGTGACG GGCAGCCGCT CACGACGCTG ATCGACCTGG AGTCCGGCAC GCAGTTGGTG
CATTACTTTG CGGGTCCTGC CAACGCAACG CTGCTCCTCA GCGCCAGCGG CGGCTACGGT
TTTCTTGCCA CGGTTGAAAA CATGACCTCA CGCCTGAAGG CCGGCAAGGC CTTCATCAGT
TGCGCGGAGG GCGAAACCGT GTGCCGGCCA TCGCACGTCT CGGGCGGAAC GGGCGCGACC
CCGCTCAACC CGGCTACGCA TGTGGCCTGC GCCTCGACGG GTGGCCGCAT CCTTACCTTC
GAGATTGCCG AACTCAAACT TCAGGCGGCC GGTGGACGCG GCTTGATGCT GCTGGACCTG
GATGCCAAGG ACACGCTGGC CGGCGCAGCG GCCTACACCC GCAGCGTGAA GATCGAAGGC
ATCGGGCGCG GTGGCAAGGC GCGGGAGGAG ACTCTGGAGA TCCGTAGCCT GAACAATGCC
CGTGCGGCGC GTGCCCGCAA AGGCAAGGCG GCCGACCTGG GCTTCAAACC GACGGGTATT
GTCCGGGTGG AATAA
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| Protein sequence | MDLFTPDAVA PIPEPADQDS LAAYAQRAYL EYALSVVKGR ALPDVCDGQK PVQRRILYSM
ARMGLGFGGA NGASGAKPVK SARVVGDVLG KYHPHGDQAA YDAMVRMAQD FSQRYPLVDG
QGNFGSRDGD GAAAMRYTEA RLARITTLLL DELDEGTVDF APNYDGSFEE PRQLPARLPF
TLLNGASGIA VGLATEIPSH NLREVADACV ALIKTPRLSD EELYTLIAGP DYPGGGQIIS
STAEIAAAYS TGRGSLKVRA RWKIEDLARG QWQLVVQELP PGVSTQRVLE EIEELTNPKI
KAGKKALSQE QVQLKQTVLS VLDVVRDESS KDAAVRLVFE PKTSRIGQSE LINTLLAHTS
LESSASINLT MVGLDGKPTQ KTLRQMLGEW IEFRQATVQR RSQHRLDKVL DRIHILEGRQ
LVLLNIDEVI AIIRQSDEPK AALIARFSLS ERQAEDILEI RLRQLARLEA IKIEQELKTL
REEQGKLEEI LGSPAALRRL LVKEIEADAK QFADPRRTLI QAEKKAVLEV KVLDEPVTVV
VSAKGWVRAR SGHGHDAASF AFKAGDGLYA TFECRTVDTL LAFGSRGRIY SVPVASLPGA
RGDGQPLTTL IDLESGTQLV HYFAGPANAT LLLSASGGYG FLATVENMTS RLKAGKAFIS
CAEGETVCRP SHVSGGTGAT PLNPATHVAC ASTGGRILTF EIAELKLQAA GGRGLMLLDL
DAKDTLAGAA AYTRSVKIEG IGRGGKAREE TLEIRSLNNA RAARARKGKA ADLGFKPTGI
VRVE
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