| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3145 |
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| Symbol | |
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| ID | 4014186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3320726 |
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| End bp | 3321679 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637942812 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_549957 |
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| Protein GI | 91789005 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.110669 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGCGA CTGGTTATTT CACTCACAAA GACTGCCGGA TGCACGAGAT GGGTCCGGGG
CATCCCGAAT GCCCCGAGCG GCTCGACGCC ATTGAAGACC GGTTGCTGGC CTCGGGCGTT
GCGGATGCGC TGGACCGGCG CGAGGCGCCG CTGGCTGCAC TGGGCGACAT CGAGCTGGCG
CACGACCGCA TGATGGTGGC GGCGATCCGC GGCCTGAGCG ATCACCTGGC CGACGACATT
GACGCGGGTG GGCCGGCCTA TGCGCAGATT GACCCGGACA CCGCACTCAA CGTCCACTCC
TGGAACGCCG CCCTGCGTGC CGCCGGTGCC GCGCTCGCGG CCACCGACAG CGTGATGGCC
GGCGAGATCG AAAACGCCTT TTGCGCCGTG CGCCCGCCGG GTCACCATGC CTGCCACAAC
AAGGCCATGG GGTTTTGCAT TTTCAACAGC GTCGCCATTG CGGCCAAATA CGCCCTGGAG
CGTCATGGCC TCAAGCGCGT GGCGGTCGTC GATTTCGACG TACACCACGG CAATGGCACC
GAAGACATCC TCAGCGGCGA CCAGCGCGTG CTGATGGTGA GTTTTTTCCA GCATCCCTTT
TATCCCTACA GCGGCACCGG AACGCATGCC AGCAACATGG TCAACGTGCC GGTGCCCGCC
TACACCAAGG GGATGGAGGT GCGCGAAATG ATCGAGACCA TCTGGATACC GCGCCTCGAG
GGCTTCAAGC CCGAGATGAT TTTCATCAGT GCCGGCTTCG ATGCACACCG GGATGATGAG
CTGGGCCAGT TGGGACTGGT GGAGCAGGAC TACGCGTGGA TCACCCAGCG AATCAAGGAT
GTGGCCAAGC GCCACGCGCA GGGCCGCATC GTGTCGTCGC TCGAAGGCGG CTACAACCTG
CGGGCGCTGG GGCGCAGCGT CGAAGCGCAT ATCCGTGTGC TGGCCGATTT GTAG
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| Protein sequence | MNATGYFTHK DCRMHEMGPG HPECPERLDA IEDRLLASGV ADALDRREAP LAALGDIELA
HDRMMVAAIR GLSDHLADDI DAGGPAYAQI DPDTALNVHS WNAALRAAGA ALAATDSVMA
GEIENAFCAV RPPGHHACHN KAMGFCIFNS VAIAAKYALE RHGLKRVAVV DFDVHHGNGT
EDILSGDQRV LMVSFFQHPF YPYSGTGTHA SNMVNVPVPA YTKGMEVREM IETIWIPRLE
GFKPEMIFIS AGFDAHRDDE LGQLGLVEQD YAWITQRIKD VAKRHAQGRI VSSLEGGYNL
RALGRSVEAH IRVLADL
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