Gene Bpro_3126 details

Gene Information

• Locus tag: Bpro_3126
• Symbol: dnaK
• ID: 4014206
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Polaromonas sp. JS666
• Kingdom: Bacteria
• Replicon accession: NC_007948
• Strand: +
• Start bp: 3299206
• End bp: 3301149
• Gene Length: 1944 bp
• Protein Length: 647 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637942793
• Product: molecular chaperone DnaK
• Protein accession: YP_549938
• Protein GI: 91788986
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0443] Molecular chaperone
• TIGRFAM ID: [TIGR02350] chaperone protein DnaK

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00776768
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.12963
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGGGAAGAA TCATCGGCAT CGACCTGGGC ACCACCAACA GCTGCGTGTC CATCATGGAA 
GGCAACACGC CCCGCGTTAT TGAAAACTCG GAAGGCGCGC GCACGACCCC GTCCATCGTC 
GCCTACCAGG AAGACGGTGA AGTGCTGGTC GGCGCCTCGG CCAAGCGCCA GGCGGTCACC 
AATGCCAAGA ACACCTTGTA CGCCATCAAG CGCCTGATCG GCCGCAAGTT CACCGAGAAG 
GAAGTCCAGA AGGACATCAA CCTCATGCCC TACAAGATCG CGGCTGCCGA CAACGGCGAC 
GCCTGGGTCG AAGTGCGCGG CAAGCAGATC TCGGCCCAGC AGGTCAGCGC GGACATTCTT 
CGCAAAATGA AAAAGACCGC TGAGGACTAC CTCGGCGAGC CCGTCACCGA AGCTGTGATC 
ACGGTGCCGG CCTACTTCAA CGACGCGCAG CGCCAAGCCA CAAAAGACGC CGGTCGCATT 
GCCGGCCTGG AAGTCAAGCG CATCATCAAC GAGCCCACCG CTGCAGCCCT GGCCTTCGGA 
CTGGACAAGC AGGAAAAGGG CGACCGCAAG ATTGCCGTAT ATGACCTGGG CGGCGGTACC 
TTCGACATCT CCATCATCGA AATTGCCGAC GTTGACGGTG AAAAACAGTT TGAAGTGCTG 
TCCACCAATG GCGACACCTT CCTGGGCGGC GAAGACTTCG ACCAGCGCAT CATCGACTAC 
ATCATTGCCG AGTTCAAAAA AGAGCAAGGC GTGGACCTGA GCAAGGACGT GCTGGCCCTG 
CAGCGCCTGA AAGAAGCCGC TGAAAAGGCC AAGATTGAAC TGTCGAACAG CGCGCAGACC 
GACATCAACC TGCCCTACAT CACCGCCGAT GCCTCAGGCC CCAAACACCT GAACATCAAG 
CTGTCCCGCG CCAAGCTGGA AGCCCTGGTG GAAGAGCTGC TCGAGCGCAC CCTTGCGCCC 
TGCCGTACCG CCATCAAGGA TGCGGGTGTG AGCGTGGGCG ACATCCACGA CGTGATCCTG 
GTCGGCGGCC AGACGCGCAT GCCCAAGGTG CAGGAGATGG TCAAGGCGTT GTTCGGCAAG 
GAGCCCCGCA AGGACGTGAA CCCCGACGAA GCGGTGGCGG TAGGCGCTGC CATTCAGGGC 
CAGGTGCTGT CGGGCGACCG CACCGACGTG CTGCTGCTCG ACGTCACCCC GCTGTCCCTC 
GGTATCGAAA CCATGGGCGG CGTGATGACC AAGATGATCA AGAAAAACAC GACCATCCCG 
ACGAAGTTTG CACAGACTTT CTCGACGGCT GAAGACAACC AGCCGGCCGT GACCATCAAG 
GTGTTCCAGG GTGAACGTGA AATCGCTTCG GGCAACAAGG CCCTGGGCGA ATTCAACCTC 
GAAGGCATTC CGCCGGCAGC ACGCGGCACG CCGCAAATTG AAGTGTCCTT CGACATCGAC 
GCCAACGGCA TCCTGCACGT CGGCGCCAAG GACAAGGGCA CCGGCAAGGA AAACAAGATC 
ACCATCAAGG CCAATTCCGG TTTGTCTGAA GCCGAAATCC AGCAGATGGT GAAAGATGCC 
GAGTTGCACT CCGCCGACGA CAAGAAAAAA GTCGAGTTCG TACAGGCCAA GAACAATGCC 
GAGGCCATGG TCCACAGCGT GCGCAAATCG CTGGGCGAGT ATGGCGACAA GCTGGAGGTC 
GGCGAAAAGG AAAAAATCGA GACCGCCATC AAGGATATGG AAGAAGCGCT CAAGGGCGAC 
GACAAAGACG CTATTGAAGC GAAAAACACG GCCCTGATGG AAGCCAGCCA GAAGCTGGGC 
GAAAAAATGT ACGCCGACAT GCAGTCATCT CAGGCAGCGG GTGCTGAAGC AGCGGCGGGC 
GGGGCAGGTG CCGAGCAGGC CCATGCCAAA CCAGCCGACG ACAACGTGGT GGACGCCGAA 
GTCAAGGAAG TCAAAAAGGG CTGA 

 

Protein sequence

MGRIIGIDLG TTNSCVSIME GNTPRVIENS EGARTTPSIV AYQEDGEVLV GASAKRQAVT 
NAKNTLYAIK RLIGRKFTEK EVQKDINLMP YKIAAADNGD AWVEVRGKQI SAQQVSADIL 
RKMKKTAEDY LGEPVTEAVI TVPAYFNDAQ RQATKDAGRI AGLEVKRIIN EPTAAALAFG 
LDKQEKGDRK IAVYDLGGGT FDISIIEIAD VDGEKQFEVL STNGDTFLGG EDFDQRIIDY 
IIAEFKKEQG VDLSKDVLAL QRLKEAAEKA KIELSNSAQT DINLPYITAD ASGPKHLNIK 
LSRAKLEALV EELLERTLAP CRTAIKDAGV SVGDIHDVIL VGGQTRMPKV QEMVKALFGK 
EPRKDVNPDE AVAVGAAIQG QVLSGDRTDV LLLDVTPLSL GIETMGGVMT KMIKKNTTIP 
TKFAQTFSTA EDNQPAVTIK VFQGEREIAS GNKALGEFNL EGIPPAARGT PQIEVSFDID 
ANGILHVGAK DKGTGKENKI TIKANSGLSE AEIQQMVKDA ELHSADDKKK VEFVQAKNNA 
EAMVHSVRKS LGEYGDKLEV GEKEKIETAI KDMEEALKGD DKDAIEAKNT ALMEASQKLG 
EKMYADMQSS QAAGAEAAAG GAGAEQAHAK PADDNVVDAE VKEVKKG