Gene Bpro_3114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBpro_3114 
Symbol 
ID4014233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolaromonas sp. JS666 
KingdomBacteria 
Replicon accessionNC_007948 
Strand
Start bp3288155 
End bp3288940 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID637942781 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_549926 
Protein GI91788974 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.361004 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.776204 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTC AAGGACAAGC CGCCCTGGTC ACCGGCGCAG GCTCCGGACT CGGGGAAGCC 
ACTGCGCGCG AGCTGGCCCG TCTGGGCGCG AAAGTCGCGG TGCTTGACGT GAATCTCGCC
AACGCCGACA AGGTCGCCGC CGAAATCAAC GCGGCGCACG GAGACGGCAG CGCCATAGCC
TGCCAATGCG ACATCACCGA CACCGAAAGC CTGCAGGCTG CCATCGCCAA AGCGACGGCC
GCGCATGGCA CTGCCCGCAT TCTGATGAGC ATTGCCGGTA TAGGCAGTGC CAAACGCGTG
GTCAGCCGCG ACGGCTCACC GGCCCCGCTG GAGGACTTTG TGCGCGTGGT GAACGTCAAC
CTGATCGGCA CCTACAACGT GGCCCGCCTG TTTGCGGCAG AGTGCGCCAA GCTGGCGCCG
CAGGAGGACG GCGAGCGCGG TGTGATGGTC TTCACCGCCT CGGTGGCCGC CTTTGATGGC
CAGGTCGGCC AGCAAGCCTA CAGCGCGTCC AAGAGTGGGG TCGTCGGCAT GACCTTACCC
ATGGCCCGCG ACCTGGCGCA GCACGGTATT CGGGTTTGCA CCATCGCCCC CGGCCTGTTT
GCAACACCGC TGATGAGAAC CCTGCCCGAG CCGGTGCAGC AGTCGCTGGC CGACAGCATT
CCGTTTCCTC CGCGCCTGGG CAAACCGGAA GAGTTCGCCC AACTGGCCAG CCACATCGTC
ACCAACATGC ACCTGAACGG CGAAGTGATT CGTCTCGACG GCGCTCTGCG CATGGCGCCA
CGCTGA
 
Protein sequence
MNIQGQAALV TGAGSGLGEA TARELARLGA KVAVLDVNLA NADKVAAEIN AAHGDGSAIA 
CQCDITDTES LQAAIAKATA AHGTARILMS IAGIGSAKRV VSRDGSPAPL EDFVRVVNVN
LIGTYNVARL FAAECAKLAP QEDGERGVMV FTASVAAFDG QVGQQAYSAS KSGVVGMTLP
MARDLAQHGI RVCTIAPGLF ATPLMRTLPE PVQQSLADSI PFPPRLGKPE EFAQLASHIV
TNMHLNGEVI RLDGALRMAP R