Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3114 |
Symbol | |
ID | 4014233 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3288155 |
End bp | 3288940 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637942781 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_549926 |
Protein GI | 91788974 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.361004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.776204 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATATTC AAGGACAAGC CGCCCTGGTC ACCGGCGCAG GCTCCGGACT CGGGGAAGCC ACTGCGCGCG AGCTGGCCCG TCTGGGCGCG AAAGTCGCGG TGCTTGACGT GAATCTCGCC AACGCCGACA AGGTCGCCGC CGAAATCAAC GCGGCGCACG GAGACGGCAG CGCCATAGCC TGCCAATGCG ACATCACCGA CACCGAAAGC CTGCAGGCTG CCATCGCCAA AGCGACGGCC GCGCATGGCA CTGCCCGCAT TCTGATGAGC ATTGCCGGTA TAGGCAGTGC CAAACGCGTG GTCAGCCGCG ACGGCTCACC GGCCCCGCTG GAGGACTTTG TGCGCGTGGT GAACGTCAAC CTGATCGGCA CCTACAACGT GGCCCGCCTG TTTGCGGCAG AGTGCGCCAA GCTGGCGCCG CAGGAGGACG GCGAGCGCGG TGTGATGGTC TTCACCGCCT CGGTGGCCGC CTTTGATGGC CAGGTCGGCC AGCAAGCCTA CAGCGCGTCC AAGAGTGGGG TCGTCGGCAT GACCTTACCC ATGGCCCGCG ACCTGGCGCA GCACGGTATT CGGGTTTGCA CCATCGCCCC CGGCCTGTTT GCAACACCGC TGATGAGAAC CCTGCCCGAG CCGGTGCAGC AGTCGCTGGC CGACAGCATT CCGTTTCCTC CGCGCCTGGG CAAACCGGAA GAGTTCGCCC AACTGGCCAG CCACATCGTC ACCAACATGC ACCTGAACGG CGAAGTGATT CGTCTCGACG GCGCTCTGCG CATGGCGCCA CGCTGA
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Protein sequence | MNIQGQAALV TGAGSGLGEA TARELARLGA KVAVLDVNLA NADKVAAEIN AAHGDGSAIA CQCDITDTES LQAAIAKATA AHGTARILMS IAGIGSAKRV VSRDGSPAPL EDFVRVVNVN LIGTYNVARL FAAECAKLAP QEDGERGVMV FTASVAAFDG QVGQQAYSAS KSGVVGMTLP MARDLAQHGI RVCTIAPGLF ATPLMRTLPE PVQQSLADSI PFPPRLGKPE EFAQLASHIV TNMHLNGEVI RLDGALRMAP R
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