Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3099 |
Symbol | |
ID | 4014218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | + |
Start bp | 3271206 |
End bp | 3272108 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637942766 |
Product | LysR family transcriptional regulator |
Protein accession | YP_549911 |
Protein GI | 91788959 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.605921 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTTGAACT TTGTCTGGCT CGATGACTTC CGCACCCTGG CGGCCACAGG CAACTTCTCG AGGGCTGCTG AAGAAAGGCA CATGACGCAG CCAGCATTCA GCCGCCGCAT TCGTGCCCTT GAGGAATGGC TGGGGGCCGA TCTATTCGAC CGGACTACAC AGCCAGCGAA ACTCACCGAA GTTGGCGAGT GGTTTCGCGG CGTGGCAGAC GAACTTATCG TGAGGGTTGC GCGCGTGCCG GGCGAGGCGC GTATCGTGGC CGAGGCAAGC TCGGTGACGC TTCGAATTGC GGCCACCCAC GCGCTTTCGT TCACCTTTTT GCCGCGATGG CTGCGCAGCC TAGAATCGAG AATCACACTC GGCCCGGTGC AACTCGTCTC AGACGTATTG CAGCGATGTG AAGCCTTGAT GCTTCAGAGC AAGGTCCAAT TCGTCCTGAG TCATGCGCAC CCTCAAGCGC AGGGCGCTCT GGACGTCGAC ACCTACCTGT CTGTCCAGAT CGGCAAGGAC ACGTTGATTC CCGTGTCATC GCCCAACGAC AAGGGCAAGC CGCTTCATCA CCTTGCGCCT CAGTCTGGTT CGATTGTTCC TGTGCTTCAG TACACGACGG AGTCTGGCTT GGGACGCATT GTTCGCGCAG TCGTCGGTCG GCAGCTCGAA TCCGTCCCCA TACGGGTCGC TTTCACGGCG CACCTTGCGT CCGTATTGAG GACAATGGCC CTGGACGGGC GAGGAATTGC CTGGCTGCCG GAGACCCTGG TCGAAGAGGA CATCACAGCG GGCCGACTCA TTGCAGCAGC CGGAGACGAT TGGAACATTC CGCTGGAGAT TCGGCTTTAT CGCGATCAGA GCCCGGCAGC AAGCGCTGCT GAAGCATTCT GGAGCACAGC CGCGGGTCGA TAA
|
Protein sequence | MLNFVWLDDF RTLAATGNFS RAAEERHMTQ PAFSRRIRAL EEWLGADLFD RTTQPAKLTE VGEWFRGVAD ELIVRVARVP GEARIVAEAS SVTLRIAATH ALSFTFLPRW LRSLESRITL GPVQLVSDVL QRCEALMLQS KVQFVLSHAH PQAQGALDVD TYLSVQIGKD TLIPVSSPND KGKPLHHLAP QSGSIVPVLQ YTTESGLGRI VRAVVGRQLE SVPIRVAFTA HLASVLRTMA LDGRGIAWLP ETLVEEDITA GRLIAAAGDD WNIPLEIRLY RDQSPAASAA EAFWSTAAGR
|
| |