| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3090 |
|---|
| Symbol | |
|---|
| ID | 4014248 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | - |
|---|
| Start bp | 3258108 |
|---|
| End bp | 3258521 |
|---|
| Gene Length | 414 bp |
|---|
| Protein Length | 137 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637942757 |
|---|
| Product | ISPsy11, transposase OrfA |
|---|
| Protein accession | YP_549902 |
|---|
| Protein GI | 91788950 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.000160805 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.326976 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAATCAG GCATTAAACG CAAGCAGGGC GATTACACGC TGGCTTTTAA GCTGTCGGTG
GTCGAGCAGG TAGAAAAAGG CGATCTCACG TACAAACAGG CCCAGCACCG CTACGGTATC
CAGGGCCGCT CGACGGTGCT GGTGTGGCTG CGCAAGCACG GACGCCAGGC GTGGGGAGAT
GCGGCATCAT CAAGGCCGAC CATGCCGATA TCCCCCAAAT CACCCCGATC CGCATCAGAC
GTGCCGCTCA CGCCCGAGCA GAAGATCAAA GCGCTCGAAG TGCAGCTTCG CGAGGCGCGC
GAGAAGGCCC AACTGTTCGA AGCCGTGCTC GATGTCCTGA AGAAGGACTA CGGCGTGCGT
GTCGTAAAAA AGCCTTTGGG CAAGTCCTCG CGCAAAAGCT CCTCCCGCAG TTGA
|
|---|
| Protein sequence | MESGIKRKQG DYTLAFKLSV VEQVEKGDLT YKQAQHRYGI QGRSTVLVWL RKHGRQAWGD
AASSRPTMPI SPKSPRSASD VPLTPEQKIK ALEVQLREAR EKAQLFEAVL DVLKKDYGVR
VVKKPLGKSS RKSSSRS
|
|---|
| |