| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3087 |
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| Symbol | |
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| ID | 4014245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3255245 |
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| End bp | 3256258 |
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| Gene Length | 1014 bp |
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| Protein Length | 337 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637942754 |
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| Product | histone deacetylase superfamily protein |
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| Protein accession | YP_549899 |
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| Protein GI | 91788947 |
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| COG category | [B] Chromatin structure and dynamics
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0123] Deacetylases, including yeast histone deacetylase and acetoin utilization protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000151146 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0282587 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAACTC GGCGCTGCGC CCTCGCTGTA GCGACGGGTA TTTTTGAGCA CCTCCCCGGT
CAACCCATGC TGCAAGCTTT TTACGCCGAT AACTTCGTGC TGCCCCTGCC GCCCGGGCAC
CGGTTTCCCA TGGGCAAATA CAAATTGCTG CGGGACCGTC TCATCAGCGA GTTGCCTCAT
GTGCAGATGG CCCAGGCGCC AGCCGCCAGC GACGGTGAAC TCGCCCTGGT GCATACGCCC
GCTTACATTG AGGCGATCAC CCACGGTAGC TTGCCCCCTG CGGCCCAGCG CGAAATCGGA
TTTCCGTGGA GTCCCGGGAT GGCCGAACGG GCACGCCGCT CGGCCGGCGC CACGGTGGCC
GCGGCGCGGG TGGCGCTGGG CACCGGTACG CGGCCCCAGG GTGTCGCGGC CAATATGGCG
GGCGGCACAC ACCATGCCTA TGCGCACAAG GGCAGTGGAT TTTGCGTGTT CAACGACTCG
GCCGTGACGG CGCGGCTGAT GCAGGCAGAG TGGGGCCGGC GGCATCGGCC GGATCGCAAA
CCGCTGCAGG TGGCGGTGAT TGACCTGGAC GTGCACCAGG GCAACGGTAC CGCGCACATC
TTTGCCAACG ATCCGAGCGT GTTCACGCTG TCATTGCATG GGCAAAAGAA TTTCCCCTTT
CGCAAGGAGG CGAGCGACCT GGATGTGGAG TTGCCCGATG GTTGTACCGA TGCGCCGTAT
CTGCAGGCGC TCGAGCATGC CCTCGACGAA CTGGATCGGC GCTTCGACCC CGGCCTGGTG
GTGTTCCTCG CCGGTGCCGA TCCTTTCGAG GGCGACCGGC TGGGGCGTCT GGCGCTCAGC
TTTGATGGGC TGGAAGCCCG TGACCGCCGC GTCTTTGACT GGGCCTGGCA ACGCCGCATC
CCCCTGACGT TTTCCATGGC AGGCGGCTAC GGCGTGAACA TTGATGAAAC CGTGCAGGTG
CAGATGAACA CCTACCGCGT CGCGCTCGAG TACTGGGCCA AATGGAATCC CTGA
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| Protein sequence | MATRRCALAV ATGIFEHLPG QPMLQAFYAD NFVLPLPPGH RFPMGKYKLL RDRLISELPH
VQMAQAPAAS DGELALVHTP AYIEAITHGS LPPAAQREIG FPWSPGMAER ARRSAGATVA
AARVALGTGT RPQGVAANMA GGTHHAYAHK GSGFCVFNDS AVTARLMQAE WGRRHRPDRK
PLQVAVIDLD VHQGNGTAHI FANDPSVFTL SLHGQKNFPF RKEASDLDVE LPDGCTDAPY
LQALEHALDE LDRRFDPGLV VFLAGADPFE GDRLGRLALS FDGLEARDRR VFDWAWQRRI
PLTFSMAGGY GVNIDETVQV QMNTYRVALE YWAKWNP
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