Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3083 |
Symbol | |
ID | 4014241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3251070 |
End bp | 3251834 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637942750 |
Product | ABC transporter related |
Protein accession | YP_549895 |
Protein GI | 91788943 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.179778 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0296505 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGG TTCAGCAACT GGTCAAGCAC TTTGGCGGCA TCAAGGCGGT CGATGGCGTG AGCTTTGAGG TCTCGGCAGG CGAGTGCGTG GCCTTGATCG GGCCCAACGG GGCGGGCAAG TCGACCTGCT TTGCCTGCAT TGCGGGCCAA TACCCGCTCA CCGGCGGCCA CATTGTGTGG AATGGGCAGG CGCTGGACGG ACTGGCCCCC GCAGCCCGTC TGGCGCGCGG TGTAGCCCGC ACGTTTCAGG TCGCGCAAGT CTTTGAAGCC CTGACAGCGC TACAAAATGT GCAGCTGGCG GCCCAGGCGG GTAAAGGGGC GCATTCGATT TCCGCGTTCA AGCGCCTGGA TGCGCTGTGC CGCGAGGAGT CGCAGGCGCT GCTGGACCAG ACGGGCCTGG GCGAGTTGGC TGGCAAGCAG GCGTTGAGCC TGCCCTACGG TGCCAAAAAG CGGCTGGAGC TGGCCGTGGC GCTGGCCGCC CGCCCACGGC TGCTGCTGCT CGATGAACCG GCTGCCGGCC TGGCCGAGGA AGAGCGGGAG GGCCTGATGC ACCTGGTCAA AGGCCTGGCC GGTCAAGCGG GTCAGGCAGG GGAGGCGATG GCTGTGCTCT ACACCGAGCA CAACATGGAT GCGGTCGCGG GCGTGGCCGA CCGCGTGCTG GTACTGATTG AGGGCCGGCT GGCGGCGCAG GGTTCGTTTG AGGAGATTTC CCGCGACAGC ACGGTGCGCA GGCGCTATCT GGGTGAAGGC GCAGCTCATG CCTGA
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Protein sequence | MLQVQQLVKH FGGIKAVDGV SFEVSAGECV ALIGPNGAGK STCFACIAGQ YPLTGGHIVW NGQALDGLAP AARLARGVAR TFQVAQVFEA LTALQNVQLA AQAGKGAHSI SAFKRLDALC REESQALLDQ TGLGELAGKQ ALSLPYGAKK RLELAVALAA RPRLLLLDEP AAGLAEEERE GLMHLVKGLA GQAGQAGEAM AVLYTEHNMD AVAGVADRVL VLIEGRLAAQ GSFEEISRDS TVRRRYLGEG AAHA
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