Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3078 |
Symbol | |
ID | 4014236 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3246111 |
End bp | 3247097 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637942745 |
Product | D-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding |
Protein accession | YP_549890 |
Protein GI | 91788938 |
COG category | [C] Energy production and conversion [H] Coenzyme transport and metabolism [R] General function prediction only |
COG ID | [COG1052] Lactate dehydrogenase and related dehydrogenases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.431872 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.295585 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCAAAC CCAAAATTCT GGTCGCACGA GCCGTCTTTC CTGAAGTGAT TGCCCGCCTG GAGCAGCATT TCGAGGTGCA GGCCAACCAG GACGACCAAA CCTGGTCCAA GGCCGAACTC ACGGAACGCC TGCGTGACAA GGATGGTGCT TTCACCACCG GCGGTGACCG CATTGACGCA GAGGTTCTTG CGGCTTGTCC CCGGCTCAAG ATCTGCGCCA ACATGGCCGT GGGCTATAAC AACTTTGATG TCGATGCCAT GACGGCGGCC AGGGTGCTGG CCACCAATGC CCCCGATGTG CTGACCGAAA CCACGGCGGA CTTCGGCTTT GCGTTGCTGA TGGCCACCGC CCGCCGCATC ACCGAGAGCG AGCACTACCT GCGTGCCGGA AAATGGACCA AGTGGAGCTA CGACATGTTT GCCGGCTCCG ACATCCATGG CGCCACGCTG GGCATTCTGG GCATGGGCCG CATCGGGCAG GGCATCGCCA AACGAGGTGC GCTGGGTTTC GGCATGAAGG TGATTTACCA CAACCGGTCC CGCCTGGAGG CCGCACTGGA AGCGGAATGC CTGGCCAGTT ATGTGAGCAA GGATGAGCTG CTCAAGACCG CCGACCACCT GGTGCTGGTG CTGCCGTACT CGCTGGCCTC ACATCACACC ATAGGCGCGG CCGAGCTGGC CCTGATGAAG CCGACGGCCA CGCTGATCAA CATTGCGCGC GGCGGCATCG TGGATGACGC CGCCTTGGCC GCTGCCTTGC GTGACAGGCG CATCGCCGCT GCCGGCCTGG ATGTGTTTGA AGGCGAGCCC AAGGTGCATC CTGACCTGCT GACCGTGCCC AATGTGGTGC TGACGCCCCA CATCGCCAGC GCCACCGTGC CCACACGACT GGCGATGGCC AACCTGGCGG CCGACAACCT GATTGCTTTC TTCGATGGAA AAAAGCCCCT GACTCCGCTG AATCCTGCGG TGTTGACTGT CCAATAA
|
Protein sequence | MSKPKILVAR AVFPEVIARL EQHFEVQANQ DDQTWSKAEL TERLRDKDGA FTTGGDRIDA EVLAACPRLK ICANMAVGYN NFDVDAMTAA RVLATNAPDV LTETTADFGF ALLMATARRI TESEHYLRAG KWTKWSYDMF AGSDIHGATL GILGMGRIGQ GIAKRGALGF GMKVIYHNRS RLEAALEAEC LASYVSKDEL LKTADHLVLV LPYSLASHHT IGAAELALMK PTATLINIAR GGIVDDAALA AALRDRRIAA AGLDVFEGEP KVHPDLLTVP NVVLTPHIAS ATVPTRLAMA NLAADNLIAF FDGKKPLTPL NPAVLTVQ
|
| |