| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3073 |
|---|
| Symbol | |
|---|
| ID | 4014268 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Polaromonas sp. JS666 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007948 |
|---|
| Strand | + |
|---|
| Start bp | 3240676 |
|---|
| End bp | 3241803 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637942740 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_549885 |
|---|
| Protein GI | 91788933 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4394] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.172057 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGACG TGCGTTTTTT GGACATCTTT TGCAAGGTCA TCGACAACTT CGGGGACATT
GGCGTGTGCT GGCGCCTGGC CGCCGACCTG GCCTCGCGCG GCCATCAGGT GCGGCTATGG
GTCGATGACG CGTCGGCACT GGACTGGATG GCCCCCGCCC GTTGCAAAGG CGTTCGCGTG
CTGCCCTGGG GCGAACCGCT GGACCTGGCC GCAGCCGGAC TTGACCAGCA GCCATCCGAC
GTGATGATTG AAGCCTTCGG CTGCGAAATT GCACCTGAAT TCATCGCTGC CTGTGTCCGG
CTTGAAAAGG CGGGCGGCAA AAAACCCGTC TGGATCAACC TCGAGTACCT GTCCGCCGAG
CCCTATGTGG AGCGCTGCCA CGCCATGCCG TCGCCCGTGC AGGGCGGACC GGCCGCCGGC
TGGATCAAGT GGTTTTTTTA CCCCGGCTTC ACCCCTTCGA CGGGCGGCCT GCTGTGCGAA
GCCGACCTGG CCGAGCGCCA GGCCCGGTTT GACCGCGCCG CCTGGCTGGC CTCCCAGTCC
ATCCCATGGC GCGGCGAAAA GCTGGTTTCG CTGTATTGCT ACGAGCCGTC CGCGCTCCCA
GGGCTGCTCG CGCATTTTGC GGCGCATGGC CTCGAGGGCC AGCCGGTGCG CCTGCTGGTA
GCGGCTGGAC GGGCGGGGAA TGCCGTGAAA GCCGCTTTGA GTCATGAAAA TTGGCCCCTG
CCCTTGGCAA ACGGTCACAA ATTGTTGTCA ATTTCACACC TGAAGCTGCT GCCGCAAGCG
CAGTTCGACC ACCTGCTGTG GGCCTGCGAC CTGAATTTTG TGCGCGGTGA AGACTCCGTG
GTGCGCGCCC TCTGGGCCGG CAAACCTTTC GTCTGGCAGA TCTACCCGCA GCACGATGAC
GCACACCAGG CCAAGCTGCA CGCCTTTCTC GACATGCTGG ATGCCCCTCC TTCATTGCGG
GCCTTTCATG CGCACTGGAA TGCGGACGAA ATCGAACTGG CCGGCGGTGC CAGCCCGGCG
CCGGACTTGC CGGCATGGCA AATAACCACA CTGGCAGCCC GGTCCCGCCT GCTGGCGCAG
CAGGACCTGA GTACCCGCCT GCTCGAATTT GTGGCAAAAA ACCGTTAA
|
|---|
| Protein sequence | MADVRFLDIF CKVIDNFGDI GVCWRLAADL ASRGHQVRLW VDDASALDWM APARCKGVRV
LPWGEPLDLA AAGLDQQPSD VMIEAFGCEI APEFIAACVR LEKAGGKKPV WINLEYLSAE
PYVERCHAMP SPVQGGPAAG WIKWFFYPGF TPSTGGLLCE ADLAERQARF DRAAWLASQS
IPWRGEKLVS LYCYEPSALP GLLAHFAAHG LEGQPVRLLV AAGRAGNAVK AALSHENWPL
PLANGHKLLS ISHLKLLPQA QFDHLLWACD LNFVRGEDSV VRALWAGKPF VWQIYPQHDD
AHQAKLHAFL DMLDAPPSLR AFHAHWNADE IELAGGASPA PDLPAWQITT LAARSRLLAQ
QDLSTRLLEF VAKNR
|
|---|
| |