| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bpro_3066 |
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| Symbol | |
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| ID | 4014261 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polaromonas sp. JS666 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007948 |
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| Strand | - |
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| Start bp | 3231826 |
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| End bp | 3232944 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637942733 |
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| Product | tartrate dehydrogenase |
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| Protein accession | YP_549878 |
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| Protein GI | 91788926 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR02089] tartrate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0824079 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.43889 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATCA CCACGACAAA CCAGGCCAGC AAGAAAAGAA TCGCAGTCAT CGCCGGTGAC
GGCATCGGCA AGGAAACCAT GCCCGAGGGC GTTCGCGTGC TGGATGCGGC GGCGCGCAAA
TTCGGCATCG ACCTGCACTT TGACCACTTC GATTTTTCCA GCTGGGACTA TTACGAAAAG
CACGGCCAGA TGATGCCGGA CAACTGGAAA GACCAGATTG GCGGGCATGA CGCGATTTAC
TTTGGTGCGG TGGGCTGGCC CGAGAAAATT GCCGACCATG TATCGTTGTG GGGTTCGTTG
CTCCTGTTCA GGCGCGAGTT TGACCAATAC ATCAACCTGC GGCCGGCGCG GCTGATGCCC
GGCATCATCG CACCGGTGGT ACGGCGTGAT GGCAGCCCGC GGCAACCCGG CGAGATCGAC
TTTTACATCG TTCGTGAAAA TACCGAGGGC GAGTACTCCA GCATCGGCGG CAGGGCGTTT
CCCGGCACCG ATCGCGAGTT TGTATTGCAG GAGTCGGTTT TTACGCGGGT CGGCGTGGAT
CGCGTTCTGA AGTTTGCGTT TGAGCTGGCC CAGTCGCGCC CCAAGAAACA CCTGACCAGC
GCGACCAAGT CCAACGGCAT TTCAATCTCC ATGCCTTACT GGGATGAACG GGTGGCCGAG
ATGGCCAAGA GCTATCCGGC GATTCGGCTG GACAAGTTTC ACATTGACAT CCTGACCGCG
CATTTTGTGC AGCGCCCGGA CTTTTTCGAT GTGGTGGTGG CCAGCAATCT GTTCGGCGAC
ATCCTGAGCG ACCTCGGACC TGCCTGCACC GGCACGATCG GTATTGCACC GAGTGCCAAC
CTGAATCCGG AGCGCAAGTT CCCTTCGCTG TTCGAGCCGG TGCATGGCTC GGCGCCGGAC
ATCGCAGGGC GCAACCTTGC CAATCCCATT GGCCAGATCT GGTGCGGCGC CATGATGATG
GAGTTCCTGG GGCACAAGGA GGCGCATGAT GCCATTCTTG CCGCGATTGA GAAAGTGCTG
CGCCCCGACA GCGGTGCACC GCGCACCCCG GACCTGGGTG GCAAGGCCGG TACGGCCGAT
GTTGGCAAGG CTGTGGCGGC TGCGCTGGCA GAGGTGTAA
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| Protein sequence | MSITTTNQAS KKRIAVIAGD GIGKETMPEG VRVLDAAARK FGIDLHFDHF DFSSWDYYEK
HGQMMPDNWK DQIGGHDAIY FGAVGWPEKI ADHVSLWGSL LLFRREFDQY INLRPARLMP
GIIAPVVRRD GSPRQPGEID FYIVRENTEG EYSSIGGRAF PGTDREFVLQ ESVFTRVGVD
RVLKFAFELA QSRPKKHLTS ATKSNGISIS MPYWDERVAE MAKSYPAIRL DKFHIDILTA
HFVQRPDFFD VVVASNLFGD ILSDLGPACT GTIGIAPSAN LNPERKFPSL FEPVHGSAPD
IAGRNLANPI GQIWCGAMMM EFLGHKEAHD AILAAIEKVL RPDSGAPRTP DLGGKAGTAD
VGKAVAAALA EV
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