Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bpro_3030 |
Symbol | |
ID | 4014299 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polaromonas sp. JS666 |
Kingdom | Bacteria |
Replicon accession | NC_007948 |
Strand | - |
Start bp | 3194948 |
End bp | 3195550 |
Gene Length | 603 bp |
Protein Length | 200 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637942695 |
Product | ABC transporter related |
Protein accession | YP_549842 |
Protein GI | 91788890 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG4181] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0284091 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGCGATA TTGATTTCTC CCTGGCGCCC CGGGAAACTG CCGCTATTGT CGGTGCCTCC GGCTCCGGCA AAAGCACGCT GCTGTCCATC ATCGCCGGGC TCGACACGCC GTCCCAGGGC ACGGTGCGGA TGGCGGGGCA AGACCTGTTT GCCCTCAATG AGGATGACCG CGCGGCCCTG CGCGCCCGCA AAGTGGGTTT TGTCTTCCAG AGCTTCCAGC TCATGGGCAA TTTGACGGCG CTTGAAAACG TCATGTTGCC GCTGGAGCTG GCCGATCAGC GAAATGCCCG CGCGCTGGCG ACCGACATGC TCAAGCGGGT CGGCTTGGGC GAGCGGCTGG GCCATTATCC CAAAGTGCTG TCGGGCGGCG AGCAGCAGCG CGTGGCACTG GCGCGGGCCT TCGTGGTGCA GCCCGCCGTG CTGCTGGCCG ACGAGCCGAC CGGCAGCCTT GACTTCGCCA CCGGCGAAAC CGTGATGGCG CTGATGTTTG AACTCAACCA GGAACTGGGC ACGACGCTGG TGCTGGTCAC GCACGACCCG ATGATCGCCG CACGCTGCGA GCGGCGCATC ACCATTGATG CCGGGCGGAT CGTCAAGGCT TGA
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Protein sequence | MRDIDFSLAP RETAAIVGAS GSGKSTLLSI IAGLDTPSQG TVRMAGQDLF ALNEDDRAAL RARKVGFVFQ SFQLMGNLTA LENVMLPLEL ADQRNARALA TDMLKRVGLG ERLGHYPKVL SGGEQQRVAL ARAFVVQPAV LLADEPTGSL DFATGETVMA LMFELNQELG TTLVLVTHDP MIAARCERRI TIDAGRIVKA
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